RNA–Protein interactions for RNA: ENST00000482017.1

MCF2L2-211, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-211ENST00000482017 NKX2-4Q9H2Z4 354 aa20.48■□□□□ 0.87
MCF2L2-211ENST00000482017 CTNND2Q9UQB3 1225 aa20.48■□□□□ 0.87
MCF2L2-211ENST00000482017 YBX2Q9Y2T7 364 aaKnown RBP20.48■□□□□ 0.87
MCF2L2-211ENST00000482017 A0A1W2PPC1 479 aa20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 HOXA2O43364 376 aa20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 CXCL8P10145 99 aa20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 YARSP54577 528 aaKnown RBP20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 STIM1Q13586 685 aa20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 BTG3Q14201 252 aaPredicted RBP20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 KLHL40Q2TBA0 621 aa20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 CRIPAKQ8N1N5 446 aa20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 ACAP3Q96P50 834 aa20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 RAD9AQ99638 391 aa20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 FAM213AQ9BRX8 229 aa20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 PBX4Q9BYU1 374 aa20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 TMEM117Q9H0C3 514 aa20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 CXCL16Q9H2A7 254 aa20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 KCTD10Q9H3F6 313 aa20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 TYW1Q9NV66 732 aaKnown RBP20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 MSRAQ9UJ68 235 aa20.47■□□□□ 0.87
MCF2L2-211ENST00000482017 CALUO43852 315 aaPredicted RBP20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 OFD1O75665 1012 aa20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 POMCP01189 267 aa20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 CA3P07451 260 aa20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 GARTP22102 1010 aa20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 SCNN1GP51170 649 aa20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 AFF1P51825 1210 aaKnown RBP20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 NOMO2Q5JPE7 1267 aa20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 GLRA4Q5JXX5 417 aa20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 SPOUT1Q5T280 376 aaKnown RBP20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 TRIML1Q8N9V2 468 aa20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 URGCPQ8TCY9 931 aa20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 CASD1Q96PB1 797 aa20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 HSPBP1Q9NZL4 362 aa20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 GIT1Q9Y2X7 761 aa20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 INSL6Q9Y581 213 aa20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 PCDHA11Q9Y5I1 949 aa20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 STYXL1Q9Y6J8 313 aa20.46■□□□□ 0.87
MCF2L2-211ENST00000482017 TRIM49BA6NDI0 452 aa20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 ARL5CA6NH57 179 aa20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 ARHGEF15O94989 841 aa20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 CLTAP09496 248 aa20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 STX17P56962 302 aa20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 HTRA4P83105 476 aaPredicted RBP20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 RNASELQ05823 741 aaKnown RBP20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 RAB30Q15771 203 aa20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 ADSSL1Q8N142 457 aa20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 RDH13Q8NBN7 331 aa20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 NELFBQ8WX92 580 aa20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 ZNF689Q96CS4 500 aaPredicted RBP20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 GTPBP4Q9BZE4 634 aaKnown RBP20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 SEMA6BQ9H3T3 888 aa20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 RPF1Q9H9Y2 349 aaKnown RBP20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 RC3H2Q9HBD1 1191 aaKnown RBP20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 MIOSQ9NXC5 875 aa20.45■□□□□ 0.86
MCF2L2-211ENST00000482017 PPP1R3GB7ZBB8 358 aa20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 SOX1O00570 391 aaPredicted RBP20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 PDXKO00764 312 aa20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 PSMA7O14818 248 aa20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 FAM189A1O60320 539 aa20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 NR3C1P04150 777 aa20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 DNAJB2P25686 324 aa20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 SPAG1Q07617 926 aa20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 SPRED2Q7Z698 418 aa20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 CMTR2Q8IYT2 770 aaKnown RBP20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 GPD1LQ8N335 351 aa20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 FIBCD1Q8N539 461 aa20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 SNX27Q96L92 541 aa20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 TSG101Q99816 390 aa20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 UBN1Q9NPG3 1134 aa20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 MRPL42Q9Y6G3 142 aaKnown RBP20.44■□□□□ 0.86
MCF2L2-211ENST00000482017 MEFVO15553 781 aaPredicted RBP20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 EXTL3O43909 919 aa20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 PMS1P54277 932 aaKnown RBP20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 NLRP12P59046 1061 aa20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 SMAD3P84022 425 aaKnown RBP20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 ENOX2Q16206 610 aaKnown RBP20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 SKOR2Q2VWA4 1001 aaPredicted RBP20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 DPCR1Q3MIW9 517 aa20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 LRIT3Q3SXY7 679 aa20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 SASS6Q6UVJ0 657 aa20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 CBWD2Q8IUF1 395 aa20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 LRRC43Q8N309 656 aa20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 GOLGA5Q8TBA6 731 aa20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 P2RX5Q93086 422 aa20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 TOPORSQ9NS56 1045 aaPredicted RBP20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 TBC1D13Q9NVG8 400 aa20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 CPSF3Q9UKF6 684 aaKnown RBP20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 MTUS1Q9ULD2 1270 aa20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 PLAGL2Q9UPG8 496 aa20.43■□□□□ 0.86
MCF2L2-211ENST00000482017 LINC01553A4QN01 128 aa20.42■□□□□ 0.86
MCF2L2-211ENST00000482017 LACTBL1A8MY62 500 aa20.42■□□□□ 0.86
MCF2L2-211ENST00000482017 EXOC3O60645 756 aa20.42■□□□□ 0.86
MCF2L2-211ENST00000482017 LDHAP00338 332 aaKnown RBP20.42■□□□□ 0.86
MCF2L2-211ENST00000482017 CCNE1P24864 410 aa20.42■□□□□ 0.86
MCF2L2-211ENST00000482017 PPP2R3AQ06190 1150 aa20.42■□□□□ 0.86
MCF2L2-211ENST00000482017 KYAT1Q16773 422 aa20.42■□□□□ 0.86
MCF2L2-211ENST00000482017 SLC10A6Q3KNW5 377 aa20.42■□□□□ 0.86
MCF2L2-211ENST00000482017 COBLL1Q53SF7 1204 aa20.42■□□□□ 0.86
MCF2L2-211ENST00000482017 CEP135Q66GS9 1140 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9457.5 ms