RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SLITRK6Q9H5Y7 841 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 TSHZ2Q9NRE2 1034 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 RGS18Q9NS28 235 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 RDH8Q9NYR8 311 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 RPS6KA6Q9UK32 745 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 RTCBQ9Y3I0 505 aaKnown RBP5.71□□□□□ -1.5
USF3-202ENST00000478658 PCDHGB5Q9Y5G0 923 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 KIF14Q15058 1648 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 WDR7Q9Y4E6 1490 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 ANO9A1A5B4 782 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 SOWAHDA6NJG2 315 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 DEXIO95424 95 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 ADD1P35611 737 aaKnown RBP5.71□□□□□ -1.5
USF3-202ENST00000478658 MNDAP41218 407 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 NUP107P57740 925 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 ADCY2Q08462 1091 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 LONRF2Q1L5Z9 754 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 SMIM5Q71RC9 77 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 LARP4BQ92615 738 aaKnown RBP5.71□□□□□ -1.5
USF3-202ENST00000478658 NPAS2Q99743 824 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 LARP6Q9BRS8 491 aaKnown RBP5.71□□□□□ -1.5
USF3-202ENST00000478658 SPATA9Q9BWV2 254 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 ZMYND12Q9H0C1 365 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 MANSC1Q9H8J5 431 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 PSTPIP2Q9H939 334 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 DNAI1Q9UI46 699 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 H7C0C1 242 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 PDHA2P29803 388 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 ATP5OP48047 213 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 ACTR3P61158 418 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 ZBED6P86452 979 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 TRAF3Q13114 568 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 KLHL26Q53HC5 615 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 CCDC137Q6PK04 289 aaKnown RBP5.71□□□□□ -1.5
USF3-202ENST00000478658 MICU3Q86XE3 530 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 SPIRE2Q8WWL2 714 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 MAML1Q92585 1016 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 FAM167AQ96KS9 214 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 REXO4Q9GZR2 422 aaKnown RBP5.71□□□□□ -1.5
USF3-202ENST00000478658 SEC31BQ9NQW1 1179 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.71□□□□□ -1.5
USF3-202ENST00000478658 MTO1Q9Y2Z2 717 aaKnown RBP5.71□□□□□ -1.5
USF3-202ENST00000478658 FAM25AB3EWG3 89 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 FAM25CB3EWG5 89 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 FAM25GB3EWG6 89 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 GGPS1O95749 300 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 S100A6P06703 90 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 FAUP35544 74 aaKnown RBP5.71□□□□□ -1.5
USF3-202ENST00000478658 KCNJ6P48051 423 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 ADCY7P51828 1080 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 VCPP55072 806 aaKnown RBP5.71□□□□□ -1.5
USF3-202ENST00000478658 RAB25P57735 213 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 PAK1Q13153 545 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 EMC2Q15006 297 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 SUPT20HL1Q3ZLR7 823 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 PACS1Q6VY07 963 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 CCDC149Q6ZUS6 474 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 TOGARAM2Q6ZUX3 1019 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 SUGP1Q8IWZ8 645 aaKnown RBP5.71□□□□□ -1.5
USF3-202ENST00000478658 ZBTB38Q8NAP3 1195 aaPredicted RBP5.71□□□□□ -1.5
USF3-202ENST00000478658 DDX17Q92841 729 aaKnown RBP5.71□□□□□ -1.5
USF3-202ENST00000478658 WWP1Q9H0M0 922 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 ANKZF1Q9H8Y5 726 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 BAIAP2L1Q9UHR4 511 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 CNPY2Q9Y2B0 182 aa5.71□□□□□ -1.5
USF3-202ENST00000478658 TJP3O95049 919 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 NR4A1P22736 598 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 MECP2P51608 486 aaKnown RBP5.7□□□□□ -1.5
USF3-202ENST00000478658 ETF1P62495 437 aaKnown RBP5.7□□□□□ -1.5
USF3-202ENST00000478658 LBRQ14739 615 aaKnown RBP5.7□□□□□ -1.5
USF3-202ENST00000478658 KLHL38Q2WGJ6 581 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 MACC1Q6ZN28 852 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 IFNEQ86WN2 208 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 MYCT1Q8N699 235 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 HPS1Q92902 700 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 FATE1Q969F0 183 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 ANKRD27Q96NW4 1050 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 SLC4A9Q96Q91 983 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 SYT4Q9H2B2 425 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 TMEM206Q9H813 350 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 SMYD2Q9NRG4 433 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 TOPORSQ9NS56 1045 aaPredicted RBP5.7□□□□□ -1.5
USF3-202ENST00000478658 A0A1W2PRG6 482 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 EVPLLA8MZ36 301 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 CYTH3O43739 400 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 PRPSAP2O60256 369 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 OXCT1P55809 520 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 PTPRNQ16849 979 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 C4orf22Q6V702 233 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 TEX2Q8IWB9 1127 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 COG1Q8WTW3 980 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 CATSPER2Q96P56 530 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 KIAA1586Q9HCI6 787 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 GMIPQ9P107 970 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 ZRANB1Q9UGI0 708 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 SGK1O00141 431 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 NDUFB5O43674 189 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 GAS7O60861 476 aa5.7□□□□□ -1.5
USF3-202ENST00000478658 TKTP29401 623 aaKnown RBP5.7□□□□□ -1.5
USF3-202ENST00000478658 KCNA1Q09470 495 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms