RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ATP5F1P24539 256 aaPredicted RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 HOXD13P35453 343 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 LTBRP36941 435 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 WDR4P57081 412 aaKnown RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 EVCP57679 992 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 ZNF445P59923 1031 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 ERVK-24P63145 666 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 HMGN5P82970 282 aaKnown RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 SRSF2Q01130 221 aaKnown RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 POU4F1Q01851 419 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 UBE3AQ05086 875 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 RING1Q06587 406 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 MOGSQ13724 837 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 EIF4A2Q14240 407 aaKnown RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 FGL2Q14314 439 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 WTAPQ15007 396 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 SF3B3Q15393 1217 aaKnown RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 KIF4BQ2VIQ3 1234 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 PAN2Q504Q3 1202 aaKnown RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 TOR2AQ5JU69 321 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 CREB3L3Q68CJ9 461 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 GPR139Q6DWJ6 353 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 TANGO2Q6ICL3 276 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 TIGD7Q6NT04 549 aaPredicted RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 TATDN1Q6P1N9 297 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 CNSTQ6PJW8 725 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 MFSD6Q6ZSS7 791 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 EP400NLQ6ZTU2 488 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 USP51Q70EK9 711 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 ZNF765Q7L2R6 523 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 CDC37L1Q7L3B6 337 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 MILR1Q7Z6M3 343 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 PRPF39Q86UA1 669 aaKnown RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 MOGAT3Q86VF5 341 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 NLRP14Q86W24 1093 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 NME9Q86XW9 330 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 CREG2Q8IUH2 290 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 EPHX4Q8IUS5 362 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 DZIP1LQ8IYY4 767 aaKnown RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 FIBCD1Q8N539 461 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 MARCH10Q8NA82 808 aaPredicted RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 ATP11CQ8NB49 1132 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 AVL9Q8NBF6 648 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 KREMEN2Q8NCW0 462 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 TTLL11Q8NHH1 800 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 CEP70Q8NHQ1 597 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 BAHD1Q8TBE0 780 aaPredicted RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 TBC1D22AQ8WUA7 517 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 CYB5D2Q8WUJ1 264 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 ANKS1AQ92625 1134 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 TAF4BQ92750 862 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 WNT8BQ93098 351 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 RRP36Q96EU6 259 aaKnown RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 ZNF845Q96IR2 970 aaPredicted RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 MSLNLQ96KJ4 702 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 MRGPRX2Q96LB1 330 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 GAS2L1Q99501 681 aaPredicted RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 ELF4Q99607 663 aaPredicted RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 C22orf23Q9BZE7 217 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 WNT8AQ9H1J5 351 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 DHX36Q9H2U1 1008 aaKnown RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 IGFLR1Q9H665 355 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 CCDC86Q9H6F5 360 aaKnown RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 RUBCNLQ9H714 662 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 TRPV4Q9HBA0 871 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 OBP2BQ9NPH6 170 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 DCAF16Q9NXF7 216 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 ZSWIM5Q9P217 1185 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 USP21Q9UK80 565 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 GTF3C4Q9UKN8 822 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 ITGB1BP2Q9UKP3 347 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 BLOC1S6Q9UL45 172 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 SLC39A10Q9ULF5 831 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 TMEM5Q9Y2B1 443 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 GPR55Q9Y2T6 319 aaPredicted RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 DYRK1BQ9Y463 629 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 SCAPERQ9BY12 1400 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 ASPMQ8IZT6 3477 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 EFCAB5A4FU69 1503 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 SYNJ2BP-COX16A0A087WUM0 186 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 KRTAP9-6A0A140TA67 174 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 A0A1W2PPC4 97 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 MED19A0JLT2 244 aaPredicted RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 LGALS16A8MUM7 142 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 TISP43B9A030 160 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 B9A039 149 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 IPO5O00410 1097 aaKnown RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 RTCAO00442 366 aaKnown RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 PSMA7O14818 248 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 SHOXO15266 292 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 PAPLNO95428 1278 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 ADAMTS2O95450 1211 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 MT-ND3P03897 115 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 CCDC159P0C7I6 412 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 SRGAP2BP0DMP2 458 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 ZSCAN22P10073 491 aaPredicted RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 HARSP12081 509 aaKnown RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 EEF2P13639 858 aaKnown RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 P4HA1P13674 534 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 OSMP13725 252 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms