RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ZNF232Q9UNY5 417 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 CYP27B1O15528 508 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 DEAF1O75398 565 aaPredicted RBP12.2□□□□□ -0.46
U2AF1-209ENST00000475639 HSPA4LO95757 839 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 KLC1Q07866 573 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 KIF19Q2TAC6 998 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.2□□□□□ -0.46
U2AF1-209ENST00000475639 UTP4Q969X6 686 aaKnown RBP12.2□□□□□ -0.46
U2AF1-209ENST00000475639 ZNF711Q9Y462 761 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 HNRNPDLO14979 420 aaKnown RBP12.2□□□□□ -0.46
U2AF1-209ENST00000475639 WFS1O76024 890 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 OR52Z1P0C646 297 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 KRT27Q7Z3Y8 459 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 SZRD1Q7Z422 152 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 BLIDQ8IZY5 108 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 DYDC2Q96IM9 177 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 CCDC134Q9H6E4 229 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 POLE3Q9NRF9 147 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 TBK1Q9UHD2 729 aa12.2□□□□□ -0.46
U2AF1-209ENST00000475639 NID2Q14112 1375 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 ZAP70P43403 619 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 ATP2C1P98194 919 aaPredicted RBP12.19□□□□□ -0.46
U2AF1-209ENST00000475639 MYBPC3Q14896 1274 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 ODR4Q5SWX8 454 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.19□□□□□ -0.46
U2AF1-209ENST00000475639 SCFD2Q8WU76 684 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 FAM89AQ96GI7 184 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 ZNF594Q96JF6 807 aaPredicted RBP12.19□□□□□ -0.46
U2AF1-209ENST00000475639 PITPNM3Q9BZ71 974 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 PSTPIP2Q9H939 334 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 ZNF229Q9UJW7 825 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 APOBEC2Q9Y235 224 aaKnown RBP12.19□□□□□ -0.46
U2AF1-209ENST00000475639 KRT87PA6NCN2 255 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 ADORA1P30542 326 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 SLCO1A2P46721 670 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 FOXO4P98177 505 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 MRPL28Q13084 256 aaKnown RBP12.19□□□□□ -0.46
U2AF1-209ENST00000475639 DLGAP5Q15398 846 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 DARS2Q6PI48 645 aaKnown RBP12.19□□□□□ -0.46
U2AF1-209ENST00000475639 NEK8Q86SG6 692 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 LONP2Q86WA8 852 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 SCG3Q8WXD2 468 aaKnown RBP12.19□□□□□ -0.46
U2AF1-209ENST00000475639 ARHGEF1Q92888 912 aaKnown RBP12.19□□□□□ -0.46
U2AF1-209ENST00000475639 GFM2Q969S9 779 aaKnown RBP12.19□□□□□ -0.46
U2AF1-209ENST00000475639 RNPEPL1Q9HAU8 725 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 SIK3Q9Y2K2 1263 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 PCDHB4Q9Y5E5 795 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 CSADQ9Y600 493 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 WDR91A4D1P6 747 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 GOLGA8SH3BPF8 625 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 KLRC1P26715 233 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 TPP2P29144 1249 aaPredicted RBP12.19□□□□□ -0.46
U2AF1-209ENST00000475639 SERPINB10P48595 397 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 POLGP54098 1239 aaPredicted RBP12.19□□□□□ -0.46
U2AF1-209ENST00000475639 RAD23BP54727 409 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 TNFAIP1Q13829 316 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 CMPK2Q5EBM0 449 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 TRAPPC3LQ5T215 181 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 KIAA1841Q6NSI8 718 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 ZNF654Q8IZM8 581 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 FITM2Q8N6M3 262 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 PYROXD1Q8WU10 500 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 RMDN2Q96LZ7 410 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 AP1M1Q9BXS5 423 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 DDX47Q9H0S4 455 aaKnown RBP12.19□□□□□ -0.46
U2AF1-209ENST00000475639 DNAAF2Q9NVR5 837 aaKnown RBP12.19□□□□□ -0.46
U2AF1-209ENST00000475639 USP15Q9Y4E8 981 aaPredicted RBP12.19□□□□□ -0.46
U2AF1-209ENST00000475639 PDLIM1O00151 329 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 MAFGO15525 162 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 KDM1AO60341 852 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 FOSP01100 380 aaPredicted RBP12.19□□□□□ -0.46
U2AF1-209ENST00000475639 MYL1P05976 194 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 CALB2P22676 271 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 TMPRSS15P98073 1019 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 TFDP1Q14186 410 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 GALNT17Q6IS24 598 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 CENPUQ71F23 418 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 METTL23Q86XA0 190 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 DCAF5Q96JK2 942 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 FMO2Q99518 471 aa12.19□□□□□ -0.46
U2AF1-209ENST00000475639 PRR23D1E9PI22 279 aaPredicted RBP12.18□□□□□ -0.46
U2AF1-209ENST00000475639 KLRC4O43908 158 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 TPBGLP0DKB5 382 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 PRR23D2P0DMB1 279 aaPredicted RBP12.18□□□□□ -0.46
U2AF1-209ENST00000475639 ALAS1P13196 640 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 IL2RBP14784 551 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 SPARCL1Q14515 664 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 HIF1AQ16665 826 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 PABPC1LQ4VXU2 614 aaKnown RBP12.18□□□□□ -0.46
U2AF1-209ENST00000475639 ARHGEF16Q5VV41 709 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 DNAJC24Q6P3W2 148 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 UCMAQ8WVF2 138 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 ULK4Q96C45 1275 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 SPATA17Q96L03 361 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 MRPS26Q9BYN8 205 aaKnown RBP12.18□□□□□ -0.46
U2AF1-209ENST00000475639 DIABLOQ9NR28 239 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 hCG_1642624A0A1W2PR95 340 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 H0Y3Z8 333 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 PEX11AO75192 247 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 ESRRBO95718 433 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms