RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 MTMR8Q96EF0 704 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 RPGRIP1Q96KN7 1286 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 CCDC42Q96M95 316 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 MED15Q96RN5 788 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 ERGIC2Q96RQ1 377 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 DUSP23Q9BVJ7 150 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 EDEM3Q9BZQ6 932 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 SSU72Q9NP77 194 aaKnown RBP6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 SLC39A2Q9NP94 309 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 PANK4Q9NVE7 773 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 CDC23Q9UJX2 597 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 PNMA2Q9UL42 364 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 FAM184BQ9ULE4 1060 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 RABGAP1Q9Y3P9 1069 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 MRFAP1Q9Y605 127 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 EPN1Q9Y6I3 576 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 V9GYY5 206 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 LTBP1Q14766 1721 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 FOCADQ5VW36 1801 aa6.46□□□□□ -1.37
ATPAF1-204ENST00000474020 CYP3A7-CYP3A51PA0A087WV96 503 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 TTC26A0AVF1 554 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 DCDC2CA8MYV0 355 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 SLC37A4O43826 429 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 CALUO43852 315 aaPredicted RBP6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 TADA3O75528 432 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 GAP43P17677 238 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 EIF4BP23588 611 aaKnown RBP6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 CYP3A7P24462 503 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 MMP14P50281 582 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 STAT2P52630 851 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 CBX1P83916 185 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 FKBP3Q00688 224 aaKnown RBP6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 RING1Q06587 406 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 STK4Q13043 487 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 COASYQ13057 564 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 GRB10Q13322 594 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 BRD3Q15059 726 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 DLGAP5Q15398 846 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 PTPN21Q16825 1174 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 ERCC6LQ2NKX8 1250 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 MAP9Q49MG5 647 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 Q4G0T1 1027 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 VWA3BQ502W6 1294 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 DACT2Q5SW24 774 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 HYIQ5T013 277 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 CCDC122Q5T0U0 273 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 ANKRD40Q6AI12 368 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 TTBK2Q6IQ55 1244 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 TATDN1Q6P1N9 297 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 SRGAP1Q7Z6B7 1085 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 FAM160B2Q86V87 743 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 GPBP1Q86WP2 473 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 FMNL3Q8IVF7 1028 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 CAGE1Q8TC20 777 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 NETO1Q8TDF5 533 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 JAKMIP2Q96AA8 810 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 MISP3Q96FF7 219 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 WDR24Q96S15 920 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 SLF1Q9BQI6 1058 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 VPS33BQ9H267 617 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 ZHX3Q9H4I2 956 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 ARFGAP3Q9NP61 516 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 PAK6Q9NQU5 681 aaPredicted RBP6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 NRXN2Q9P2S2 1712 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 TCEAL9Q9UHQ7 104 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 DDX41Q9UJV9 622 aaKnown RBP6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 DNM3Q9UQ16 869 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 SLC5A6Q9Y289 635 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 CTDP1Q9Y5B0 961 aaPredicted RBP6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 CSADQ9Y600 493 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 PITPNM2Q9BZ72 1349 aa6.46□□□□□ -1.38
ATPAF1-204ENST00000474020 ATRNL1Q5VV63 1379 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 CDK5RAP2Q96SN8 1893 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 MYH8P13535 1937 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 ANO9A1A5B4 782 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 ANKRD33BA6NCL7 494 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 MYMKA6NI61 221 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 EIF3CLB5ME19 914 aaKnown RBP6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 F5H6K3 240 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 GCOM1H8Y6P7 765 aaPredicted RBP6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 TRAF5O00463 557 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 ADAMTS3O15072 1205 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 CETN3O15182 167 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 FANCGO15287 622 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 AKR1B10O60218 316 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 TACC1O75410 805 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 LEFTY1O75610 366 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 PLA2G4BP0C869 781 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 POLR2MP0CAP2 368 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 FCER1AP12319 257 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 H2AFXP16104 143 aaPredicted RBP6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 NTF4P34130 210 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 SREBF1P36956 1147 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 KLRC3Q07444 240 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 MTF1Q14872 753 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 MEA1Q16626 185 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 AOC3Q16853 763 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 EDRF1Q3B7T1 1238 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms