RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	ZBTB41	Q5SVQ8	909 aa		11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	TCERG1L	Q5VWI1	586 aa		11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	USP37	Q86T82	979 aa		11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	TRIM59	Q8IWR1	403 aa		11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	CCDC127	Q96BQ5	260 aa		11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	FAM212A	Q96EL1	285 aa		11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	MFSD14A	Q96MC6	490 aa		11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	ACAP3	Q96P50	834 aa		11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	EIF2A	Q9BY44	585 aa	Known RBP	11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	IFIH1	Q9BYX4	1025 aa	Known RBP	11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	XPO4	Q9C0E2	1151 aa	Known RBP	11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	RPF1	Q9H9Y2	349 aa	Known RBP	11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	RBAK	Q9NYW8	714 aa	Predicted RBP	11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	TBX21	Q9UL17	535 aa		11.46	□□□□□ -0.57
PUM1-208	ENST00000471894	RBAK-RBAKDN	I3L0D1	243 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	NBN	O60934	754 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	ADCY5	O95622	1261 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	CLTA	P09496	248 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	TNFSF9	P41273	254 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	GRM5	P41594	1212 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	PPP2R3A	Q06190	1150 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	KCNH2	Q12809	1159 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	BFSP1	Q12934	665 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	UBXN11	Q5T124	520 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	APTX	Q7Z2E3	356 aa	Known RBP	11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	CEP120	Q8N960	986 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	TMC2	Q8TDI7	906 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	ABHD8	Q96I13	439 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	SCLY	Q96I15	445 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	FNBP1	Q96RU3	617 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	ADAM2	Q99965	735 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	CCDC94	Q9BW85	323 aa	Predicted RBP	11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	TMX1	Q9H3N1	280 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	NDST4	Q9H3R1	872 aa		11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	RTN4	Q9NQC3	1192 aa	Known RBP	11.45	□□□□□ -0.58
PUM1-208	ENST00000471894	CPSF3	Q9UKF6	684 aa	Known RBP	11.45	□□□□□ -0.58
PUM1-208	ENST00000471894		A0A1B0GTH6	734 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	CCDC85C	A6NKD9	419 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	LGALS16	A8MUM7	142 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	KIAA0355	O15063	1070 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	FAM189A1	O60320	539 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	STX10	O60499	249 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	TIMP1	P01033	207 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	AFP	P02771	609 aa	Known RBP	11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	DLAT	P10515	647 aa	Known RBP	11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	RAG1	P15918	1043 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	ZNF75D	P51815	510 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	YARS	P54577	528 aa	Known RBP	11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	DLG4	P78352	724 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	POU5F1	Q01860	360 aa	Known RBP	11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	UBXN1	Q04323	297 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	DSC3	Q14574	896 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	GPNMB	Q14956	572 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	NR1I3	Q14994	352 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	PSMD6	Q15008	389 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	SURF1	Q15526	300 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	PLEKHG4	Q58EX7	1191 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	MIIP	Q5JXC2	388 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	FKBP15	Q5T1M5	1219 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	BRSK2	Q8IWQ3	736 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	TMEM192	Q8IY95	271 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	DBF4B	Q8NFT6	615 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	PARD3B	Q8TEW8	1205 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	SEPT8	Q92599	483 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	POP1	Q99575	1024 aa	Known RBP	11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	APOL6	Q9BWW8	343 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	FTHL17	Q9BXU8	183 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	WNT8A	Q9H1J5	351 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	MMRN2	Q9H8L6	949 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	PDE11A	Q9HCR9	933 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	FAM105A	Q9NUU6	356 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	SNTG2	Q9NY99	539 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	PARP2	Q9UGN5	583 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	HES2	Q9Y543	173 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	PCDHB2	Q9Y5E7	798 aa		11.44	□□□□□ -0.58
PUM1-208	ENST00000471894	TRIM43B	A6NCK2	446 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	LACTBL1	A8MY62	500 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	TEX33	O43247	280 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	MGEA5	O60502	916 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	IL18RAP	O95256	599 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	TRIM49	P0CI25	452 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	TRIM49C	P0CI26	452 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	CXCL8	P10145	99 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	SKI	P12755	728 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	TNNI1	P19237	187 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	IBSP	P21815	317 aa	Predicted RBP	11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	ENPEP	Q07075	957 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	ENOX2	Q16206	610 aa	Known RBP	11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	DEFB128	Q7Z7B8	93 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	DRC7	Q8IY82	874 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	HACE1	Q8IYU2	909 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	PLEKHO2	Q8TD55	490 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	APBB2	Q92870	758 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	SLC35C1	Q96A29	364 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	NXF3	Q9H4D5	531 aa	Known RBP	11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	PRKAG2	Q9UGJ0	569 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms