RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 LRRC71Q8N4P6 559 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 GMCL1P1Q8NEA9 526 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 ARPC5LQ9BPX5 153 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 COL5A3P25940 1745 aaPredicted RBP13.2□□□□□ -0.3
USP11-206ENST00000469080 HEXIM1O94992 359 aaKnown RBP13.2□□□□□ -0.3
USP11-206ENST00000469080 KRT14P02533 472 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 DMP1Q13316 513 aaPredicted RBP13.2□□□□□ -0.3
USP11-206ENST00000469080 MTM1Q13496 603 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 TRIP13Q15645 432 aaPredicted RBP13.2□□□□□ -0.3
USP11-206ENST00000469080 Q3C1V9 767 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 DAB2IPQ5VWQ8 1189 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 MCF2L2Q86YR7 1114 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 NLRP4Q96MN2 994 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 CEP72Q9P209 647 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 SUN2Q9UH99 717 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 CYP26A1O43174 497 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 P4HBP07237 508 aaKnown RBP13.19□□□□□ -0.3
USP11-206ENST00000469080 LIG4P49917 911 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 ADCY1Q08828 1119 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 FSTL1Q12841 308 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 DCAF15Q66K64 600 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 C16orf87Q6PH81 154 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 TRIM59Q8IWR1 403 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 THNSL1Q8IYQ7 743 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 ZNF280CQ8ND82 737 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 SLC20A1Q8WUM9 679 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 UBLCP1Q8WVY7 318 aaPredicted RBP13.19□□□□□ -0.3
USP11-206ENST00000469080 MYO3BQ8WXR4 1341 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 FOXN3O00409 490 aaPredicted RBP13.19□□□□□ -0.3
USP11-206ENST00000469080 HMGB2P26583 209 aaKnown RBP13.19□□□□□ -0.3
USP11-206ENST00000469080 AADACL2Q6P093 401 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 CACNA2D3Q8IZS8 1091 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 CLMNQ96JQ2 1002 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 AGPAT3Q9NRZ7 376 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 ZNF541Q9H0D2 1346 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 GNA14O95837 355 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 FAM107AO95990 144 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 FUT4P22083 530 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 MXI1P50539 228 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 MRPS9P82933 396 aaKnown RBP13.19□□□□□ -0.3
USP11-206ENST00000469080 SKOR1P84550 965 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 LLGL2Q6P1M3 1020 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 CAPN12Q6ZSI9 719 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 ZBTB45Q96K62 511 aaPredicted RBP13.19□□□□□ -0.3
USP11-206ENST00000469080 FAM81BQ96LP2 452 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 PPP1R12CQ9BZL4 782 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 TAS2R14Q9NYV8 317 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 VAV3Q9UKW4 847 aa13.19□□□□□ -0.3
USP11-206ENST00000469080 KRIT1O00522 736 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 MAP3K13O43283 966 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 ICAM1P05362 532 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 GJB1P08034 283 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 ALDH3A1P30838 453 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 ABL2P42684 1182 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 DYNC1I2Q13409 638 aaKnown RBP13.18□□□□□ -0.3
USP11-206ENST00000469080 EPHA7Q15375 998 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 CFAP221Q4G0U5 840 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 SPOPLQ6IQ16 392 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 CCNI2Q6ZMN8 369 aaPredicted RBP13.18□□□□□ -0.3
USP11-206ENST00000469080 SPATA4Q8NEY3 305 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 TRAPPC12Q8WVT3 735 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 DCPSQ96C86 337 aaKnown RBP13.18□□□□□ -0.3
USP11-206ENST00000469080 CELF4Q9BZC1 486 aaKnown RBP13.18□□□□□ -0.3
USP11-206ENST00000469080 NACA2Q9H009 215 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 ADAMTSL1Q8N6G6 1762 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 PIK3R2O00459 728 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 NR1D1P20393 614 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 ORC1Q13415 861 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 GPR162Q16538 588 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 CEP128Q6ZU80 1094 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 GET4Q7L5D6 327 aaPredicted RBP13.18□□□□□ -0.3
USP11-206ENST00000469080 DTNBP1Q96EV8 351 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 IFT74Q96LB3 600 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 A6NHS1 94 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 PSMD10O75832 226 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 KCNA3P22001 575 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 KLHDC7AQ5VTJ3 777 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 CPLX4Q7Z7G2 160 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 PALB2Q86YC2 1186 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 LMNTD2Q8IXW0 634 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 ADAM33Q9BZ11 813 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 INTS2Q9H0H0 1204 aaKnown RBP13.18□□□□□ -0.3
USP11-206ENST00000469080 KCTD10Q9H3F6 313 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 LAMB2P55268 1798 aa13.18□□□□□ -0.3
USP11-206ENST00000469080 ASTN1O14525 1302 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 IGLV3-22A0A075B6J6 115 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.17□□□□□ -0.3
USP11-206ENST00000469080 INO80B-WBP1J3KQ70 363 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 TGFB1I1O43294 461 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 CYP3A4P08684 503 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 FMO5P49326 533 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 GALCP54803 685 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 SPIRE1Q08AE8 756 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 XRCC4Q13426 336 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 LONP2Q86WA8 852 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 DEPTORQ8TB45 409 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 PDCD2LQ9BRP1 358 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 INO80BQ9C086 356 aaPredicted RBP13.17□□□□□ -0.3
USP11-206ENST00000469080 KLHL11Q9NVR0 708 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 DOCK2Q92608 1830 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms