RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	SLC26A4	O43511	780 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	TBCA	O75347	108 aa	Known RBP	13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	BRD1	O95696	1058 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	SOD2	P04179	222 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	EPCAM	P16422	314 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	MLH1	P40692	756 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	MTHFR	P42898	656 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	NAMPT	P43490	491 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	PEX3	P56589	373 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	KRT85	P78386	507 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	PTPN21	Q16825	1174 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	FAM187B	Q17R55	369 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	CES5A	Q6NT32	575 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	USP49	Q70CQ1	688 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	PPFIBP1	Q86W92	1011 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	GSTCD	Q8NEC7	633 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	KCNG4	Q8TDN1	519 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	BSND	Q8WZ55	320 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	LARP4B	Q92615	738 aa	Known RBP	13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	RAD54L	Q92698	747 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	GAD1	Q99259	594 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	APOL6	Q9BWW8	343 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	C2orf40	Q9H1Z8	148 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	RNF39	Q9H2S5	420 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	NXF3	Q9H4D5	531 aa	Known RBP	13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	POMK	Q9H5K3	350 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	CDH22	Q9UJ99	828 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	GIT1	Q9Y2X7	761 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	TMEM221	A6NGB7	291 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	SFI1	A8K8P3	1242 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507		M0R296	226 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	FAM13A	O94988	1023 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	PAPLN	O95428	1278 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	POMC	P01189	267 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	ALDH2	P05091	517 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	PRKCB	P05771	671 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	SIGLEC14	Q08ET2	396 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	MAPK6	Q16659	721 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	SLC27A1	Q6PCB7	646 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	CCDC73	Q6ZRK6	1079 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	CDR2L	Q86X02	465 aa	Predicted RBP	13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	GPR65	Q8IYL9	337 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	HACE1	Q8IYU2	909 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	SYT2	Q8N9I0	419 aa	Predicted RBP	13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	CHAMP1	Q96JM3	812 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	SPATA32	Q96LK8	384 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	MFSD14A	Q96MC6	490 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	RIPOR3	Q96MK2	946 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	KLHL5	Q96PQ7	755 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	FAM193B	Q96PV7	902 aa	Predicted RBP	13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	APOL5	Q9BWW9	433 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	CCSER1	Q9C0I3	900 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	FZD8	Q9H461	694 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	KMT5A	Q9NQR1	393 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	FAN1	Q9Y2M0	1017 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	NR2E1	Q9Y466	385 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	HES2	Q9Y543	173 aa		13.98	□□□□□ -0.17
FDPS-204	ENST00000461507	MYO10	Q9HD67	2058 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	CUTA	O60888	179 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	PPP6R2	O75170	966 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	CNP	P09543	421 aa	Known RBP	13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	SCNN1G	P51170	649 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	CLCN4	P51793	760 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	SLC12A3	P55017	1021 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	GRIK3	Q13003	919 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	PRPF4B	Q13523	1007 aa	Known RBP	13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	ATL3	Q6DD88	541 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	C1orf186	Q6ZWK4	172 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	KCTD17	Q8N5Z5	321 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	ASIC4	Q96FT7	647 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	ZFP42	Q96MM3	310 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	TIPIN	Q9BVW5	301 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	EMILIN2	Q9BXX0	1053 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	RHOBTB2	Q9BYZ6	727 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	CCDC113	Q9H0I3	377 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	SFXN1	Q9H9B4	322 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	MIOS	Q9NXC5	875 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	FAM13B	Q9NYF5	915 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	STK17A	Q9UEE5	414 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	UST	Q9Y2C2	406 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	CACNA1H	O95180	2353 aa		13.97	□□□□□ -0.17
FDPS-204	ENST00000461507	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	C2CD4D	B7Z1M9	353 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	SLC16A4	O15374	487 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	NPTXR	O95502	500 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	C1R	P00736	705 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	UROD	P06132	367 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	GUCY2C	P25092	1073 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	CA8	P35219	290 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	NPTX2	P47972	431 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	SMTN	P53814	917 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	NUCB2	P80303	420 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	RARS2	Q5T160	578 aa	Known RBP	13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	KIAA0319	Q5VV43	1072 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	DYM	Q7RTS9	669 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	GPR149	Q86SP6	731 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	ZDHHC14	Q8IZN3	488 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	MYCT1	Q8N699	235 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms