RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 FBXO41Q8TF61 875 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 CASKIN2Q8WXE0 1202 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 CFHR4Q92496 578 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 CDK5RAP3Q96JB5 506 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 CLPTM1LQ96KA5 538 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 MRGPRX4Q96LA9 322 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 TOX2Q96NM4 488 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 DMRTA2Q96SC8 542 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 GPHA2Q96T91 129 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 SENP6Q9GZR1 1112 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 DDX21Q9NR30 783 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 TMEM140Q9NV12 185 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 PUF60Q9UHX1 559 aaKnown RBP5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 STXBP5LQ9Y2K9 1186 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 PEG3Q9GZU2 1588 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 TPP1O14773 563 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 GPR32O75388 356 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 C8AP07357 584 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 PHKG2P15735 406 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 RHCEP18577 417 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 PTPN7P35236 360 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 CASRP41180 1078 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 TXKP42681 527 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 RHDQ02161 417 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 NOGQ13253 232 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 HDAC1Q13547 482 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 ACAP1Q15027 740 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 ANO6Q4KMQ2 910 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 GADL1Q6ZQY3 521 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 ZNF572Q7Z3I7 529 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 DAAM2Q86T65 1068 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 KIAA0319LQ8IZA0 1049 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 PJA1Q8NG27 643 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 OR5M3Q8NGP4 307 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 KLHDC4Q8TBB5 520 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 RAB24Q969Q5 203 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 TMX3Q96JJ7 454 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 FAM167AQ96KS9 214 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 SAMD11Q96NU1 681 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 LRFN3Q9BTN0 628 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 B3GNT5Q9BYG0 378 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 ENKD1Q9H0I2 346 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 LDAHQ9H6V9 325 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 IL23AQ9NPF7 189 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 NCDNQ9UBB6 729 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 NR2E3Q9Y5X4 410 aa5.51□□□□□ -1.53
HMGB1P16-201ENST00000447155 MYBBP1AQ9BQG0 1328 aaKnown RBP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 CCER2I3L3R5 266 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 TEX33O43247 280 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 CNOT4O95628 575 aaKnown RBP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 AMY1AP04745 511 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 IL2RBP14784 551 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 SYN1P17600 705 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 DDCP20711 480 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 GZMKP49863 264 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 AGFG1P52594 562 aaKnown RBP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 NPEPPSP55786 919 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 TLE1Q04724 770 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 SP140Q13342 867 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 RIN1Q13671 783 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 UBE4AQ14139 1066 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 LLGL1Q15334 1064 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 SAFBQ15424 915 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 COBLL1Q53SF7 1204 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 CCDC157Q569K6 752 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 PRAMEF14Q5SWL7 426 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 NT5DC1Q5TFE4 455 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 NPNTQ6UXI9 565 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 ADGRE4PQ86SQ3 457 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 LRRC56Q8IYG6 542 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 ZGPATQ8N5A5 531 aaKnown RBP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 SHCBP1Q8NEM2 672 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 REPS2Q8NFH8 660 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 MDM1Q8TC05 714 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 IFI44Q8TCB0 444 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 IL17RAQ96F46 866 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 NEIL1Q96FI4 390 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 PTPN18Q99952 460 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 ZNF700Q9H0M5 742 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 SEC61A2Q9H9S3 476 aa5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 AJAP1Q9UKB5 411 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P16-201ENST00000447155 TOP2AP11388 1531 aaKnown RBP5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 POLR1AO95602 1720 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 A0A088AWK7 358 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 ANO9A1A5B4 782 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 CAPN8A6NHC0 703 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 LRRC14BA6NHZ5 514 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 MATN2O00339 956 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 SASH1O94885 1247 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 NBPF7P0C2Y1 421 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 FLT3LGP49771 235 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 CACNB3P54284 484 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 CTXN1P60606 82 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 PPP2CBP62714 309 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 PPP2CAP67775 309 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 FAM193AP78312 1265 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 GPSM2P81274 684 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 ATP8B2P98198 1209 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 APBA1Q02410 837 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms