RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 PRPF4BQ13523 1007 aaKnown RBP20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 NFRKBQ6P4R8 1299 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 SYCE1Q8N0S2 351 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 NOA1Q8NC60 698 aaKnown RBP20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 TPCN2Q8NHX9 752 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 CTNNBL1Q8WYA6 563 aaPredicted RBP20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 RFFLQ8WZ73 363 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 CGRRF1Q99675 332 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 HAPLN2Q9GZV7 340 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 KATNBL1Q9H079 304 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 EPC1Q9H2F5 836 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 SUCLA2Q9P2R7 463 aaPredicted RBP20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 COL1A2P08123 1366 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 ANKRD62A6NC57 917 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 CLDN3O15551 220 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 NCK2O43639 380 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 TOM1L1O75674 476 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 C4BPAP04003 597 aaKnown RBP20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 AP3M2P53677 418 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 MAPK6Q16659 721 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 CCDC181Q5TID7 509 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 PLEKHH3Q7Z736 793 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 SLFN11Q7Z7L1 901 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 DPP9Q86TI2 863 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 LRRC57Q8N9N7 239 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 HNRNPLLQ8WVV9 542 aaKnown RBP20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 ZNF516Q92618 1163 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 KAT5Q92993 513 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 ZBTB45Q96K62 511 aaPredicted RBP20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 C1orf112Q9NSG2 853 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 ANKFY1Q9P2R3 1169 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 TARSL2A2RTX5 802 aaKnown RBP20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 PDE2AO00408 941 aaPredicted RBP20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 ZRANB2O95218 330 aaKnown RBP eCLIP20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 LGALS2P05162 132 aa20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 EDN1P05305 212 aa20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 PRKCBP05771 671 aa20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 TNNI1P19237 187 aa20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 ACOT2P49753 483 aa20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 POU5F1BQ06416 359 aa20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 TCEAL1Q15170 157 aa20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 LRRC71Q8N4P6 559 aa20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 MSL3Q8N5Y2 521 aaKnown RBP20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 RNF149Q8NC42 400 aa20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 COG1Q8WTW3 980 aa20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 ARFGAP3Q9NP61 516 aa20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 ZNF446Q9NWS9 450 aa20.34■□□□□ 0.85
SEMA3D-202ENST00000444867 SLC15A5A6NIM6 579 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 MAGEB2O15479 319 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 ERLIN1O75477 346 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 FTCDO95954 541 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 GZMAP12544 262 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 USP8P40818 1118 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 SURF1Q15526 300 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 CFAP221Q4G0U5 840 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 WDR44Q5JSH3 913 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 TMEM63BQ5T3F8 832 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 CCDC70Q6NSX1 233 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 CC2D1AQ6P1N0 951 aaPredicted RBP20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 WDR93Q6P2C0 686 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 BRSK2Q8IWQ3 736 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 RPUSD2Q8IZ73 545 aaKnown RBP20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 MMGT1Q8N4V1 131 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 EPS8L1Q8TE68 723 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 MAML3Q96JK9 1138 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 ACO2Q99798 780 aaKnown RBP20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 NFKBIZQ9BYH8 718 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 ISCUQ9H1K1 167 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 PDE11AQ9HCR9 933 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 ZCCHC17Q9NP64 241 aaKnown RBP20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 SEPT11Q9NVA2 429 aaKnown RBP20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 SLC5A4Q9NY91 659 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 OGFRQ9NZT2 677 aa20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 NOCTQ9UK39 431 aaKnown RBP20.33■□□□□ 0.84
SEMA3D-202ENST00000444867 EVPLQ92817 2033 aa20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 RTN2O75298 545 aa20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 C22orf31O95567 290 aa20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 SNAI1O95863 264 aaPredicted RBP20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 HLA-DRAP01903 254 aa20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 RHOXF2BP0C7M4 288 aa20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 SRGAP2CP0DJJ0 459 aa20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 HADHBP55084 474 aaKnown RBP20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 RPS6KA1Q15418 735 aa20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 EFCAB12Q6NXP0 572 aa20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 RHOT2Q8IXI1 618 aa20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 SLC20A1Q8WUM9 679 aa20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 DHX38Q92620 1227 aaKnown RBP20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 RUBCNQ92622 972 aa20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 TAF4BQ92750 862 aa20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 PTPN18Q99952 460 aa20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 RHOXF2Q9BQY4 288 aa20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 CNTNAP2Q9UHC6 1331 aa20.32■□□□□ 0.84
SEMA3D-202ENST00000444867 OGTO15294 1046 aa20.31■□□□□ 0.84
SEMA3D-202ENST00000444867 PPFIA4O75335 1185 aa20.31■□□□□ 0.84
SEMA3D-202ENST00000444867 SGPL1O95470 568 aa20.31■□□□□ 0.84
SEMA3D-202ENST00000444867 PIK3CAP42336 1068 aa20.31■□□□□ 0.84
SEMA3D-202ENST00000444867 PDE6CP51160 858 aa20.31■□□□□ 0.84
SEMA3D-202ENST00000444867 MCL1Q07820 350 aa20.31■□□□□ 0.84
SEMA3D-202ENST00000444867 IRF5Q13568 498 aa20.31■□□□□ 0.84
SEMA3D-202ENST00000444867 TDRD10Q5VZ19 366 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms