RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 Q6ZVL8 140 aa4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 SPRED1Q7Z699 444 aa4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 SGMS1Q86VZ5 419 aa4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 ELOA2Q8IYF1 753 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 SH3RF3Q8TEJ3 882 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 CDK5RAP1Q96SZ6 601 aaKnown RBP4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 RTFDC1Q9BY42 306 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 LANCL2Q9NS86 450 aa4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 ZIM2Q9NZV7 527 aa4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 PNMA8BQ9ULN7 279 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 CAPN14A8MX76 684 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 WNT10BO00744 389 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 HTRA2O43464 458 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 RPLP2P05387 115 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 U2AF1L5P0DN76 240 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 HIBADHP31937 336 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 U2AF1Q01081 240 aaKnown RBP eCLIP4.8□□□□□ -1.641e-6■■□□□ 12.9
TRAPPC13-204ENST00000438419 HHEXQ03014 270 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 ELAVL1Q15717 326 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 C1QL3Q5VWW1 255 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 PPP4R3AQ6IN85 833 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 Q6ZRM9 215 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 TRMT2AQ8IZ69 625 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 PQLC1Q8N2U9 271 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 JPH3Q8WXH2 748 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 DPF2Q92785 391 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 EXTL1Q92935 676 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 EPC1Q9H2F5 836 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 IPPQ9Y573 584 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 CFAP20Q9Y6A4 193 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 ZMYM3Q14202 1370 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 CCDC154A6NI56 674 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 ADCY6O43306 1168 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 SGTAO43765 313 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 IPO13O94829 963 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 SCGB1D2O95969 90 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 IL2RBP14784 551 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 ACRV1P26436 265 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 CYP2C19P33261 490 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 PTPN7P35236 360 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 SREBF1P36956 1147 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 FLT3LGP49771 235 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 SCNN1GP51170 649 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 RABGGTBP53611 331 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 APBA1Q02410 837 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 SP140Q13342 867 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 CSRP2Q16527 193 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 RRP12Q5JTH9 1297 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 PRAMEF14Q5SWL7 426 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 ZNF572Q7Z3I7 529 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 APBB1IPQ7Z5R6 666 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 RAVER1Q8IY67 606 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 CHPFQ8IZ52 775 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 ANKRD35Q8N283 1001 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 MDGA1Q8NFP4 955 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 OR2I1PQ8NGU4 316 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 IL17DQ8TAD2 202 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 MDM1Q8TC05 714 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 MIEF2Q96C03 454 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 LSM14BQ9BX40 385 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 SENP6Q9GZR1 1112 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 TMEM140Q9NV12 185 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 SERPINB13Q9UIV8 391 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 LIMCH1Q9UPQ0 1083 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 MYRFQ9Y2G1 1151 aa4.8□□□□□ -1.64
TRAPPC13-204ENST00000438419 B5MCH6 92 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 MATN3O15232 486 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 TEX33O43247 280 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 GNAT2P19087 354 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 EDNRBP24530 442 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 GUCY1A2P33402 732 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 SLC6A9P48067 706 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 CDC42EP1Q00587 391 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 PUM1Q14671 1186 aaKnown RBP eCLIP4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 USP39Q53GS9 565 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 CXorf57Q6NSI4 855 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 DOK3Q7L591 496 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 RHOT1Q8IXI2 618 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 CASKIN2Q8WXE0 1202 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 AIFM3Q96NN9 605 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 PDCD2LQ9BRP1 358 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 TDP1Q9NUW8 608 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 MOCS1Q9NZB8 636 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 SIK3Q9Y2K2 1263 aa4.79□□□□□ -1.64
TRAPPC13-204ENST00000438419 KLRG2A4D1S0 409 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 CYP27B1O15528 508 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 TSPAN6O43657 245 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 AKAP8O43823 692 aaKnown RBP4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 MFAP3LO75121 409 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 GPR32O75388 356 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 PARNO95453 639 aaKnown RBP4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 POU2F2P09086 479 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 TNFRSF1AP19438 455 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 PTH1RQ03431 593 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 GTF2H3Q13889 308 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 RRP1BQ14684 758 aaKnown RBP4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 C3orf36Q3SXR2 165 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 FAM47AQ5JRC9 791 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 315 ms