RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 CMPK2Q5EBM0 449 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 CDCA2Q69YH5 1023 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 ALG1LQ6GMV1 187 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 KRT25Q7Z3Z0 450 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 LCA5Q86VQ0 697 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 HOOK3Q86VS8 718 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 ZNF513Q8N8E2 541 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 ANKS4BQ8N8V4 417 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 CCDC197Q8NCU1 140 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 SDR42E1Q8WUS8 393 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 KCTD12Q96CX2 325 aaKnown RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 LZTS2Q9BRK4 669 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 HERPUD2Q9BSE4 406 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 GLIS2Q9BZE0 524 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 MMRN2Q9H8L6 949 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 BLOC1S4Q9NUP1 217 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 DNAAF2Q9NVR5 837 aaKnown RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 SUCLA2Q9P2R7 463 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 PGAP2Q9UHJ9 254 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 CNOT7Q9UIV1 285 aaKnown RBP8.68□□□□□ -1.02
VTI1A-202ENST00000432306 STXBP5LQ9Y2K9 1186 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 ROBO3Q96MS0 1386 aa8.68□□□□□ -1.02
VTI1A-202ENST00000432306 POTEMA6NI47 508 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 MINDY4BA8MYZ0 360 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 STXBP3O00186 592 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 GFPT2O94808 682 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 F2P00734 622 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 HOXA10P31260 410 aaPredicted RBP8.67□□□□□ -1.02
VTI1A-202ENST00000432306 TSPAN7P41732 249 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 SSR1P43307 286 aaKnown RBP8.67□□□□□ -1.02
VTI1A-202ENST00000432306 ZNF131P52739 623 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 CLNS1AP54105 237 aaKnown RBP8.67□□□□□ -1.02
VTI1A-202ENST00000432306 FKBP3Q00688 224 aaKnown RBP8.67□□□□□ -1.02
VTI1A-202ENST00000432306 TRADDQ15628 312 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 CLUL1Q15846 466 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 GALNTL6Q49A17 601 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 LRCH2Q5VUJ6 765 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 DPY19L2P1Q6NXN4 242 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 LYPD8Q6UX82 237 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 BTNL9Q6UXG8 535 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 SV2BQ7L1I2 683 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 PODNQ7Z5L7 613 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 TRIM50Q86XT4 487 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 APLFQ8IW19 511 aaPredicted RBP8.67□□□□□ -1.02
VTI1A-202ENST00000432306 TRIM59Q8IWR1 403 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 GBP7Q8N8V2 638 aaPredicted RBP8.67□□□□□ -1.02
VTI1A-202ENST00000432306 MIGA1Q8NAN2 632 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 CCDC26Q8TAB7 109 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 ATXN2LQ8WWM7 1075 aaKnown RBP8.67□□□□□ -1.02
VTI1A-202ENST00000432306 TCP11Q8WWU5 503 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 TAF4BQ92750 862 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 TRMT2BQ96GJ1 504 aaKnown RBP8.67□□□□□ -1.02
VTI1A-202ENST00000432306 RBM17Q96I25 401 aaKnown RBP8.67□□□□□ -1.02
VTI1A-202ENST00000432306 PSMB7Q99436 277 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 HINFPQ9BQA5 517 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 NEUROG2Q9H2A3 272 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 ATP8A2Q9NTI2 1148 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 LRP2BPQ9P2M1 347 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 ARPP21Q9UBL0 812 aaPredicted RBP8.67□□□□□ -1.02
VTI1A-202ENST00000432306 TRMT112Q9UI30 125 aaKnown RBP8.67□□□□□ -1.02
VTI1A-202ENST00000432306 C15orf41Q9Y2V0 281 aa8.67□□□□□ -1.02
VTI1A-202ENST00000432306 hCG_1984214I3L0E3 225 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 OAS1P00973 400 aaKnown RBP8.66□□□□□ -1.02
VTI1A-202ENST00000432306 MZF1P28698 734 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-202ENST00000432306 GBP1P32455 592 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 HPDP32754 393 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-202ENST00000432306 HUNKP57058 714 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 GRB10Q13322 594 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 SQSTM1Q13501 440 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 PDIA5Q14554 519 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 ARMC3Q5W041 872 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 CEP57Q86XR8 500 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 ZNF354CQ86Y25 554 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 ZNF713Q8N859 430 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-202ENST00000432306 SUPT20HQ8NEM7 779 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 CFAP61Q8NHU2 1237 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 PGBD4Q96DM1 585 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 MTMR9Q96QG7 549 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 CRAMP1Q96RY5 1269 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 TSG101Q99816 390 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 SPZ1Q9BXG8 430 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 GANQ9H2C0 597 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 ADAM7Q9H2U9 754 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 KMT5AQ9NQR1 393 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 ATAD5Q96QE3 1844 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 A0A087X0T9 212 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 MYMKA6NI61 221 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 ABLIM1O14639 778 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 PPEF1O14829 653 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-202ENST00000432306 AKAP10O43572 662 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 WFS1O76024 890 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 DKK1O94907 266 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 FTCDO95954 541 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 AGTP01019 485 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 FAM228BP0C875 321 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 CCND1P24385 295 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 TMOD1P28289 359 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 ETFBP38117 255 aa8.66□□□□□ -1.02
VTI1A-202ENST00000432306 SKIV2L2P42285 1042 aaKnown RBP8.66□□□□□ -1.02
VTI1A-202ENST00000432306 MAGOHP61326 146 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms