RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 FNDC1Q4ZHG4 1894 aaPredicted RBP10.23□□□□□ -0.77
NUP50-206ENST00000422489 KIAA1671Q9BY89 1806 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 PLXNA4Q9HCM2 1894 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 TMEM221A6NGB7 291 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 M0R296 226 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 TEX28O15482 410 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 RECQL4O94761 1208 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 EDN1P05305 212 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 ADH1AP07327 375 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 HARSP12081 509 aaKnown RBP10.22□□□□□ -0.77
NUP50-206ENST00000422489 NPTX2P47972 431 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 OSTNP61366 133 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 ATP2C1P98194 919 aaPredicted RBP10.22□□□□□ -0.77
NUP50-206ENST00000422489 TUSC3Q13454 348 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 DHX8Q14562 1220 aaKnown RBP10.22□□□□□ -0.77
NUP50-206ENST00000422489 HSP90AA2PQ14568 343 aaPredicted RBP10.22□□□□□ -0.77
NUP50-206ENST00000422489 USP41Q3LFD5 358 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 FUT10Q6P4F1 479 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 TRIM67Q6ZTA4 783 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 C1orf186Q6ZWK4 172 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 APBB1IPQ7Z5R6 666 aaPredicted RBP10.22□□□□□ -0.77
NUP50-206ENST00000422489 PBXIP1Q96AQ6 731 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 DRC1Q96MC2 740 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 MFSD14AQ96MC6 490 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 PNMA5Q96PV4 448 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 PAAF1Q9BRP4 392 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 RUSC1Q9BVN2 902 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 TARS2Q9BW92 718 aaKnown RBP10.22□□□□□ -0.77
NUP50-206ENST00000422489 GPR62Q9BZJ7 368 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 CCDC113Q9H0I3 377 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 ADAM28Q9UKQ2 775 aa10.22□□□□□ -0.77
NUP50-206ENST00000422489 NPHP3-ACAD11A0A0J9YXS1 232 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 CCDC195A0A1B0GUA6 201 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 VPS37CA5D8V6 355 aaPredicted RBP10.21□□□□□ -0.77
NUP50-206ENST00000422489 C2CD4DB7Z1M9 353 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 PTGESO14684 152 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 SLC16A4O15374 487 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 GLUD1P00367 558 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 PLA2G4BP0C869 781 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 RPL17P18621 184 aaKnown RBP10.21□□□□□ -0.77
NUP50-206ENST00000422489 UBA7P41226 1012 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 YARSP54577 528 aaKnown RBP10.21□□□□□ -0.77
NUP50-206ENST00000422489 DSG1Q02413 1049 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 DMP1Q13316 513 aaPredicted RBP10.21□□□□□ -0.77
NUP50-206ENST00000422489 PTPN21Q16825 1174 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 DCAF4L1Q3SXM0 396 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 FAM171A1Q5VUB5 890 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 ELMSAN1Q6PJG2 1045 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 PRSS55Q6UWB4 352 aaPredicted RBP10.21□□□□□ -0.77
NUP50-206ENST00000422489 HFE2Q6ZVN8 426 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 GPR149Q86SP6 731 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 DAW1Q8N136 415 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 SYT2Q8N9I0 419 aaPredicted RBP10.21□□□□□ -0.77
NUP50-206ENST00000422489 RASSF8Q8NHQ8 419 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 FEZF2Q8TBJ5 459 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 ACO2Q99798 780 aaKnown RBP10.21□□□□□ -0.77
NUP50-206ENST00000422489 CCDC94Q9BW85 323 aaPredicted RBP10.21□□□□□ -0.77
NUP50-206ENST00000422489 MRPL4Q9BYD3 311 aaKnown RBP10.21□□□□□ -0.77
NUP50-206ENST00000422489 NT5C3AQ9H0P0 336 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 TMEM134Q9H6X4 195 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 SFXN1Q9H9B4 322 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 PIDD1Q9HB75 910 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 RXFP1Q9HBX9 757 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 MAN1C1Q9NR34 630 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 CHST7Q9NS84 486 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 LIMD1Q9UGP4 676 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 DPP7Q9UHL4 492 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 TNFSF13BQ9Y275 285 aa10.21□□□□□ -0.77
NUP50-206ENST00000422489 RBM19Q9Y4C8 960 aaKnown RBP10.21□□□□□ -0.77
NUP50-206ENST00000422489 MYO7AQ13402 2215 aa10.21□□□□□ -0.78
NUP50-206ENST00000422489 EFEMP2O95967 443 aa10.2□□□□□ -0.78
NUP50-206ENST00000422489 MATR3P43243 847 aaKnown RBP eCLIP10.2□□□□□ -0.78
NUP50-206ENST00000422489 SMTNP53814 917 aa10.2□□□□□ -0.78
NUP50-206ENST00000422489 STRN3Q13033 797 aa10.2□□□□□ -0.78
NUP50-206ENST00000422489 ZNF568Q3ZCX4 644 aa10.2□□□□□ -0.78
NUP50-206ENST00000422489 GLRA4Q5JXX5 417 aa10.2□□□□□ -0.78
NUP50-206ENST00000422489 ARL6IP4Q66PJ3 421 aaKnown RBP10.2□□□□□ -0.78
NUP50-206ENST00000422489 TDRD5Q8NAT2 981 aaKnown RBP10.2□□□□□ -0.78
NUP50-206ENST00000422489 KREMEN2Q8NCW0 462 aa10.2□□□□□ -0.78
NUP50-206ENST00000422489 ACSF2Q96CM8 615 aaPredicted RBP10.2□□□□□ -0.78
NUP50-206ENST00000422489 CALML4Q96GE6 196 aa10.2□□□□□ -0.78
NUP50-206ENST00000422489 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.2□□□□□ -0.78
NUP50-206ENST00000422489 KCNG1Q9UIX4 513 aa10.2□□□□□ -0.78
NUP50-206ENST00000422489 SF3B1O75533 1304 aaKnown RBP eCLIP10.19□□□□□ -0.782e-7■■■■■ 41.4
NUP50-206ENST00000422489 TGM5O43548 720 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 RFPL2O75678 378 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 B3GAT3O94766 335 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 KIF4AO95239 1232 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 KRT18P05783 430 aaKnown RBP10.19□□□□□ -0.78
NUP50-206ENST00000422489 ASGR2P07307 311 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 PLS3P13797 630 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 GUCY2CP25092 1073 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 PLA2G5P39877 138 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 SIGLEC14Q08ET2 396 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 MAPK7Q13164 816 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 SF3A1Q15459 793 aaKnown RBP10.19□□□□□ -0.78
NUP50-206ENST00000422489 SEZ6Q53EL9 994 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 RTP2Q5QGT7 225 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 DCLRE1AQ6PJP8 1040 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 CCDC149Q6ZUS6 474 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms