RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 KAT2BQ92831 832 aa17.06■□□□□ 0.32
HOXD3-202ENST00000410016 CYFIP2Q96F07 1278 aa17.06■□□□□ 0.32
HOXD3-202ENST00000410016 STBD1O95210 358 aa17.06■□□□□ 0.32
HOXD3-202ENST00000410016 SOX10P56693 466 aa17.06■□□□□ 0.32
HOXD3-202ENST00000410016 IFFO1Q0D2I5 559 aa17.06■□□□□ 0.32
HOXD3-202ENST00000410016 DMP1Q13316 513 aaPredicted RBP17.06■□□□□ 0.32
HOXD3-202ENST00000410016 RNF207Q6ZRF8 634 aa17.06■□□□□ 0.32
HOXD3-202ENST00000410016 SV2AQ7L0J3 742 aa17.06■□□□□ 0.32
HOXD3-202ENST00000410016 C3orf20Q8ND61 904 aa17.06■□□□□ 0.32
HOXD3-202ENST00000410016 SPIRE2Q8WWL2 714 aa17.06■□□□□ 0.32
HOXD3-202ENST00000410016 ELMO3Q96BJ8 720 aa17.06■□□□□ 0.32
HOXD3-202ENST00000410016 MOV10L1Q9BXT6 1211 aaKnown RBP17.06■□□□□ 0.32
HOXD3-202ENST00000410016 PDGFDQ9GZP0 370 aaPredicted RBP17.06■□□□□ 0.32
HOXD3-202ENST00000410016 VPS33BQ9H267 617 aa17.06■□□□□ 0.32
HOXD3-202ENST00000410016 UVRAGQ9P2Y5 699 aa17.06■□□□□ 0.32
HOXD3-202ENST00000410016 TESPA1A2RU30 521 aaPredicted RBP17.05■□□□□ 0.32
HOXD3-202ENST00000410016 ZNF862O60290 1169 aa17.05■□□□□ 0.32
HOXD3-202ENST00000410016 RARAP10276 462 aa17.05■□□□□ 0.32
HOXD3-202ENST00000410016 SEL1L2Q5TEA6 688 aa17.05■□□□□ 0.32
HOXD3-202ENST00000410016 VSIG10LQ86VR7 867 aa17.05■□□□□ 0.32
HOXD3-202ENST00000410016 RAPGEF5Q92565 580 aa17.05■□□□□ 0.32
HOXD3-202ENST00000410016 DHX38Q92620 1227 aaKnown RBP17.05■□□□□ 0.32
HOXD3-202ENST00000410016 TATDN2Q93075 761 aa17.05■□□□□ 0.32
HOXD3-202ENST00000410016 MYOZ2Q9NPC6 264 aa17.05■□□□□ 0.32
HOXD3-202ENST00000410016 KMT5AQ9NQR1 393 aa17.05■□□□□ 0.32
HOXD3-202ENST00000410016 RIPK3Q9Y572 518 aa17.05■□□□□ 0.32
HOXD3-202ENST00000410016 PCDHA10Q9Y5I2 948 aa17.05■□□□□ 0.32
HOXD3-202ENST00000410016 GTF2H1P32780 548 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 COILP38432 576 aaPredicted RBP17.04■□□□□ 0.32
HOXD3-202ENST00000410016 CYP24A1Q07973 514 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 SLC29A2Q14542 456 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 ARHGEF16Q5VV41 709 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 RDM1Q8NG50 284 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 ZNF653Q96CK0 615 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 WNK4Q96J92 1243 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 NT5C1BQ96P26 610 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 SENP7Q9BQF6 1050 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 SEMA4AQ9H3S1 761 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 PDLIM7Q9NR12 457 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 ADGRA3Q8IWK6 1321 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 SPOPO43791 374 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 FNTAP49354 379 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 BYSLQ13895 437 aaKnown RBP17.04■□□□□ 0.32
HOXD3-202ENST00000410016 UBAP2Q5T6F2 1119 aaKnown RBP17.04■□□□□ 0.32
HOXD3-202ENST00000410016 ACAD10Q6JQN1 1059 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 AEBP2Q6ZN18 517 aaPredicted RBP17.04■□□□□ 0.32
HOXD3-202ENST00000410016 MICALCLQ6ZW33 695 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 NIM1KQ8IY84 436 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 OTUD6BQ8N6M0 293 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 PSPC1Q8WXF1 523 aaKnown RBP17.04■□□□□ 0.32
HOXD3-202ENST00000410016 PGM2Q96G03 612 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 C17orf75Q9HAS0 396 aa17.04■□□□□ 0.32
HOXD3-202ENST00000410016 CNOT7Q9UIV1 285 aaKnown RBP17.04■□□□□ 0.32
HOXD3-202ENST00000410016 VWA5AO00534 786 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 EGFRP00533 1210 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 GBP1P32455 592 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 PDE6CP51160 858 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 QPCTQ16769 361 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 NSMFQ6X4W1 530 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 C12orf50Q8NA57 414 aaPredicted RBP17.03■□□□□ 0.32
HOXD3-202ENST00000410016 KIFAP3Q92845 792 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 DDX20Q9UHI6 824 aaKnown RBP17.03■□□□□ 0.32
HOXD3-202ENST00000410016 C5orf60A6NFR6 353 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 CTNND1O60716 968 aaKnown RBP17.03■□□□□ 0.32
HOXD3-202ENST00000410016 DPEP1P16444 411 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 KCNJ1P48048 391 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 RWDD2BP57060 319 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 MTMR2Q13614 643 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 BAATQ14032 418 aaPredicted RBP17.03■□□□□ 0.32
HOXD3-202ENST00000410016 HOOK3Q86VS8 718 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 MDM1Q8TC05 714 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 POMGNT1Q8WZA1 660 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 ART4Q93070 314 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 CEP170P1Q96L14 293 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 RPAP3Q9H6T3 665 aaPredicted RBP17.03■□□□□ 0.32
HOXD3-202ENST00000410016 LRRC19Q9H756 370 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 PNMA2Q9UL42 364 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 TELO2Q9Y4R8 837 aa17.03■□□□□ 0.32
HOXD3-202ENST00000410016 TULP1O00294 542 aaPredicted RBP17.02■□□□□ 0.32
HOXD3-202ENST00000410016 TP73O15350 636 aa17.02■□□□□ 0.32
HOXD3-202ENST00000410016 ZBED4O75132 1171 aa17.02■□□□□ 0.32
HOXD3-202ENST00000410016 KIAA0754O94854 1291 aa17.02■□□□□ 0.32
HOXD3-202ENST00000410016 FSBPO95073 299 aa17.02■□□□□ 0.32
HOXD3-202ENST00000410016 CLEC16AQ2KHT3 1053 aa17.02■□□□□ 0.32
HOXD3-202ENST00000410016 DENND2CQ68D51 928 aa17.02■□□□□ 0.32
HOXD3-202ENST00000410016 XRRA1Q6P2D8 792 aa17.02■□□□□ 0.32
HOXD3-202ENST00000410016 C15orf39Q6ZRI6 1047 aa17.02■□□□□ 0.32
HOXD3-202ENST00000410016 TAS1R3Q7RTX0 852 aa17.02■□□□□ 0.32
HOXD3-202ENST00000410016 CNOT10Q9H9A5 744 aaKnown RBP17.02■□□□□ 0.32
HOXD3-202ENST00000410016 GABBR1Q9UBS5 961 aa17.02■□□□□ 0.32
HOXD3-202ENST00000410016 PARP2Q9UGN5 583 aa17.02■□□□□ 0.32
HOXD3-202ENST00000410016 TCEAL9Q9UHQ7 104 aa17.02■□□□□ 0.32
HOXD3-202ENST00000410016 MTUS1Q9ULD2 1270 aa17.02■□□□□ 0.32
HOXD3-202ENST00000410016 RGS20O76081 388 aa17.02■□□□□ 0.31
HOXD3-202ENST00000410016 CALCAP01258 141 aa17.02■□□□□ 0.31
HOXD3-202ENST00000410016 NR3C2P08235 984 aa17.02■□□□□ 0.31
HOXD3-202ENST00000410016 DLATP10515 647 aaKnown RBP17.02■□□□□ 0.31
HOXD3-202ENST00000410016 UNGP13051 313 aaPredicted RBP17.02■□□□□ 0.31
HOXD3-202ENST00000410016 GCNT1Q02742 428 aa17.02■□□□□ 0.31
HOXD3-202ENST00000410016 IFT88Q13099 833 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms