RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 ITGA2BP08514 1039 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 FDPSP14324 419 aaKnown RBP10.56□□□□□ -0.72
PTPRM-203ENST00000400060 CDC25CP30307 473 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 PSMC2P35998 433 aaKnown RBP10.56□□□□□ -0.72
PTPRM-203ENST00000400060 GPC5P78333 572 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 TRPC7Q9HCX4 862 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 ANGPTL3Q9Y5C1 460 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 ZNF532Q9HCE3 1301 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 PBX1P40424 430 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 LPIN1Q14693 890 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 MRPL1Q9BYD6 325 aaKnown RBP10.56□□□□□ -0.72
PTPRM-203ENST00000400060 MANSC1Q9H8J5 431 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 CCPG1Q9ULG6 757 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 STX8Q9UNK0 236 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 H3BNX3 289 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 ASMTLO95671 621 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 CD151P48509 253 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 ADCY7P51828 1080 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 KLHDC7AQ5VTJ3 777 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 ARMC3Q5W041 872 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 KRT27Q7Z3Y8 459 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 CCDC124Q96CT7 223 aaKnown RBP10.56□□□□□ -0.72
PTPRM-203ENST00000400060 TSPAN18Q96SJ8 248 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 TMEM109Q9BVC6 243 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 POLD4Q9HCU8 107 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 MLXIPLQ9NP71 852 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 SORCS3Q9UPU3 1222 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 SQORQ9Y6N5 450 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 ASNA1O43681 348 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 EPHB2P29323 1055 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 NSFP46459 744 aaKnown RBP10.56□□□□□ -0.72
PTPRM-203ENST00000400060 EPHB1P54762 984 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 PTENP60484 403 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 MYL7Q01449 175 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 CTDSPL2Q05D32 466 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 NR5A1Q13285 461 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 PUM3Q15397 648 aaKnown RBP10.56□□□□□ -0.72
PTPRM-203ENST00000400060 CYTH1Q15438 398 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 QPCTQ16769 361 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 PEX5LQ8IYB4 626 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 PDIK1LQ8N165 341 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 FAM89AQ96GI7 184 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 GIN1Q9NXP7 522 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 CAB39Q9Y376 341 aaPredicted RBP10.56□□□□□ -0.72
PTPRM-203ENST00000400060 MAD1L1Q9Y6D9 718 aa10.56□□□□□ -0.72
PTPRM-203ENST00000400060 SALL1Q9NSC2 1324 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 POTEB3A0JP26 581 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 LYNP07948 512 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 TMEM253P0C7T8 217 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 MSL3P1P0C860 447 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 SCNN1BP51168 640 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 MFAP3P55082 362 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 ERVK-9P63128 1117 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 CENPCQ03188 943 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 ZC3H12AQ5D1E8 599 aaKnown RBP10.55□□□□□ -0.72
PTPRM-203ENST00000400060 POTEBQ6S5H4 581 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 GPBP1Q86WP2 473 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 TTC17Q96AE7 1141 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 EME1Q96AY2 570 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 CCSER1Q9C0I3 900 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 INTS13Q9NVM9 706 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 RRN3Q9NYV6 651 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 ZNF180Q9UJW8 692 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 NR2F2P24468 414 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 MAPK4P31152 587 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 PARP10Q53GL7 1025 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 HDAC7Q8WUI4 952 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 C7orf25Q9BPX7 421 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 DDX25Q9UHL0 483 aaKnown RBP10.55□□□□□ -0.72
PTPRM-203ENST00000400060 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.55□□□□□ -0.72
PTPRM-203ENST00000400060 KCNQ3O43525 872 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 SPAG6O75602 509 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 ITGA6P23229 1130 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 DRG2P55039 364 aaKnown RBP10.55□□□□□ -0.72
PTPRM-203ENST00000400060 KRT17Q04695 432 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 FCHO2Q0JRZ9 810 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 USP4Q13107 963 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 ALX1Q15699 326 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 HADHQ16836 314 aaKnown RBP10.55□□□□□ -0.72
PTPRM-203ENST00000400060 TMC5Q6UXY8 1006 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 PACS1Q6VY07 963 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.55□□□□□ -0.723e-7■■■□□ 14.9
PTPRM-203ENST00000400060 HERC5Q9UII4 1024 aaKnown RBP10.55□□□□□ -0.72
PTPRM-203ENST00000400060 BARX2Q9UMQ3 279 aaPredicted RBP10.55□□□□□ -0.72
PTPRM-203ENST00000400060 FADS3Q9Y5Q0 445 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 TNKSO95271 1327 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 PPRC1Q5VV67 1664 aaKnown RBP10.55□□□□□ -0.72
PTPRM-203ENST00000400060 MYO3AQ8NEV4 1616 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 JCADQ9P266 1359 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 PRR36Q9H6K5 1346 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 PALM3A6NDB9 673 aaPredicted RBP10.55□□□□□ -0.72
PTPRM-203ENST00000400060 H3BRJ5 948 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 PDE8AO60658 829 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 KCNA2P16389 499 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 PLCG1P19174 1290 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 YWHAGP61981 247 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTPRM-203ENST00000400060 ANO7Q6IWH7 933 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 TTC27Q6P3X3 843 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 REXO1Q8N1G1 1221 aaKnown RBP10.55□□□□□ -0.72
PTPRM-203ENST00000400060 MAGED4Q96JG8 741 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms