RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 NLRP10Q86W26 655 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 SGSM3Q96HU1 749 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 AGPAT1Q99943 283 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.01■□□□□ 0.31
ITSN1-209ENST00000399352 M0R3G1 203 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 PHF2O75151 1096 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 EIF3EP60228 445 aaKnown RBP17.01■□□□□ 0.31
ITSN1-209ENST00000399352 AP3B2Q13367 1082 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 KIAA1841Q6NSI8 718 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 KIRREL3Q8IZU9 778 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.01■□□□□ 0.313e-6■■■■■ 50.8
ITSN1-209ENST00000399352 ZFYVE19Q96K21 471 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 PRPF18Q99633 342 aaKnown RBP17.01■□□□□ 0.31
ITSN1-209ENST00000399352 AFF4Q9UHB7 1163 aaKnown RBP17.01■□□□□ 0.31
ITSN1-209ENST00000399352 MLH1P40692 756 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 ANO4Q32M45 955 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 TMEM47Q9BQJ4 181 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 BEGAINQ9BUH8 593 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 MAGEB5Q9BZ81 275 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 AIPL1Q9NZN9 384 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 LCMT1Q9UIC8 334 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 EIF4G3O43432 1585 aaKnown RBP17.01■□□□□ 0.31
ITSN1-209ENST00000399352 SERPINB1P30740 379 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 SLC18A3Q16572 532 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 MIGA2Q7L4E1 593 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 SLC35G2Q8TBE7 412 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 FAM49AQ9H0Q0 323 aaPredicted RBP17.01■□□□□ 0.31
ITSN1-209ENST00000399352 MAST1Q9Y2H9 1570 aa17.01■□□□□ 0.31
ITSN1-209ENST00000399352 LOC100653049A0A140TA62 436 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 CYP26A1O43174 497 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 KRT34O76011 436 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 CC2D2BQ6DHV5 1058 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 SPATA31E1Q6ZUB1 1445 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 MYBL1P10243 752 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 SCP2P22307 547 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 VHLP40337 213 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 TC2NQ8N9U0 490 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 MRPL1Q9BYD6 325 aaKnown RBP17■□□□□ 0.31
ITSN1-209ENST00000399352 ATP6V0A4Q9HBG4 840 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 PCMTD2Q9NV79 361 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 MLH3Q9UHC1 1453 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 LOC102724428A0A0B4J2F2 783 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 SIK1P57059 783 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 MTM1Q13496 603 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 C6orf10Q5SRN2 563 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 PID1Q7Z2X4 250 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 TTC30BQ8N4P2 665 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 CELF4Q9BZC1 486 aaKnown RBP17■□□□□ 0.31
ITSN1-209ENST00000399352 KIAA1586Q9HCI6 787 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 DGKIO75912 1065 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 CAAP1Q9H8G2 361 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 PSMC3IPQ9P2W1 217 aaPredicted RBP17■□□□□ 0.31
ITSN1-209ENST00000399352 PI4KBQ9UBF8 816 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 ABCC10Q5T3U5 1492 aa17■□□□□ 0.31
ITSN1-209ENST00000399352 PPEF1O14829 653 aaPredicted RBP16.99■□□□□ 0.31
ITSN1-209ENST00000399352 TMCC1O94876 653 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 NME3Q13232 169 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 KYNUQ16719 465 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 EXOSC4Q9NPD3 245 aaKnown RBP16.99■□□□□ 0.31
ITSN1-209ENST00000399352 SEL1LQ9UBV2 794 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 E2F8A0AVK6 867 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 NFIBO00712 420 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 ZBTB5O15062 677 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 TARSP26639 723 aaKnown RBP16.99■□□□□ 0.31
ITSN1-209ENST00000399352 GALCP54803 685 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 TSPY1Q01534 308 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 LRRC31Q6UY01 552 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 RRM2BQ7LG56 351 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 FAM118BQ9BPY3 351 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 GYS1P13807 737 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 EML4Q9HC35 981 aaKnown RBP16.99■□□□□ 0.31
ITSN1-209ENST00000399352 NEU2Q9Y3R4 380 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 TDP2O95551 362 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 MTMR1Q13613 665 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 PTK2BQ14289 1009 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 ZNF568Q3ZCX4 644 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 KDELC2Q7Z4H8 507 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 SLC30A5Q8TAD4 765 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 HSPBP1Q9NZL4 362 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 CHMP2BQ9UQN3 213 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 PRR23D1E9PI22 279 aaPredicted RBP16.99■□□□□ 0.31
ITSN1-209ENST00000399352 F8W8V4 182 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 PDE5AO76074 875 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 PRR23D2P0DMB1 279 aaPredicted RBP16.99■□□□□ 0.31
ITSN1-209ENST00000399352 TBXAS1P24557 533 aaPredicted RBP16.99■□□□□ 0.31
ITSN1-209ENST00000399352 PLOD1Q02809 727 aaPredicted RBP16.99■□□□□ 0.31
ITSN1-209ENST00000399352 CATSPER4Q7RTX7 472 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 PRPF39Q86UA1 669 aaKnown RBP16.99■□□□□ 0.31
ITSN1-209ENST00000399352 TEX2Q8IWB9 1127 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 CNBD2Q96M20 576 aa16.99■□□□□ 0.31
ITSN1-209ENST00000399352 CCDC78A2IDD5 438 aa16.98■□□□□ 0.31
ITSN1-209ENST00000399352 KCNN4O15554 427 aa16.98■□□□□ 0.31
ITSN1-209ENST00000399352 TBC1D4O60343 1298 aa16.98■□□□□ 0.31
ITSN1-209ENST00000399352 APRTP07741 180 aa16.98■□□□□ 0.31
ITSN1-209ENST00000399352 EPHA10Q5JZY3 1008 aa16.98■□□□□ 0.31
ITSN1-209ENST00000399352 LVRNQ6Q4G3 990 aa16.98■□□□□ 0.31
ITSN1-209ENST00000399352 SH3RF3Q8TEJ3 882 aaPredicted RBP16.98■□□□□ 0.31
ITSN1-209ENST00000399352 PGBD4Q96DM1 585 aa16.98■□□□□ 0.31
ITSN1-209ENST00000399352 MMTAG2Q9BU76 263 aaKnown RBP16.98■□□□□ 0.31
ITSN1-209ENST00000399352 DHX36Q9H2U1 1008 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms