RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 XRRA1Q6P2D8 792 aa25.54■■□□□ 1.68
PABPN1-202ENST00000397276 MREGQ8N565 214 aa25.54■■□□□ 1.68
PABPN1-202ENST00000397276 RDM1Q8NG50 284 aa25.54■■□□□ 1.68
PABPN1-202ENST00000397276 SHC3Q92529 594 aa25.54■■□□□ 1.68
PABPN1-202ENST00000397276 NTPCRQ9BSD7 190 aaKnown RBP25.54■■□□□ 1.68
PABPN1-202ENST00000397276 CARD9Q9H257 536 aa25.54■■□□□ 1.68
PABPN1-202ENST00000397276 GGA3Q9NZ52 723 aa25.54■■□□□ 1.68
PABPN1-202ENST00000397276 UTP11Q9Y3A2 253 aaKnown RBP25.54■■□□□ 1.68
PABPN1-202ENST00000397276 FZD9O00144 591 aa25.53■■□□□ 1.68
PABPN1-202ENST00000397276 DGAT1O75907 488 aa25.53■■□□□ 1.68
PABPN1-202ENST00000397276 FNTAP49354 379 aa25.53■■□□□ 1.68
PABPN1-202ENST00000397276 SWT1Q5T5J6 900 aaKnown RBP25.53■■□□□ 1.68
PABPN1-202ENST00000397276 CATSPERGQ6ZRH7 1159 aa25.53■■□□□ 1.68
PABPN1-202ENST00000397276 TAS1R3Q7RTX0 852 aa25.53■■□□□ 1.68
PABPN1-202ENST00000397276 UBLCP1Q8WVY7 318 aaPredicted RBP25.53■■□□□ 1.68
PABPN1-202ENST00000397276 SENP7Q9BQF6 1050 aa25.53■■□□□ 1.68
PABPN1-202ENST00000397276 SLITRK6Q9H5Y7 841 aa25.53■■□□□ 1.68
PABPN1-202ENST00000397276 HSPA9P38646 679 aaKnown RBP25.53■■□□□ 1.68
PABPN1-202ENST00000397276 CNTN2Q02246 1040 aa25.53■■□□□ 1.68
PABPN1-202ENST00000397276 PHLDB2Q86SQ0 1253 aa25.53■■□□□ 1.68
PABPN1-202ENST00000397276 OTUD6BQ8N6M0 293 aa25.53■■□□□ 1.68
PABPN1-202ENST00000397276 CEP89Q96ST8 783 aa25.53■■□□□ 1.68
PABPN1-202ENST00000397276 SEPT14Q6ZU15 432 aa25.52■■□□□ 1.68
PABPN1-202ENST00000397276 GPD1LQ8N335 351 aa25.52■■□□□ 1.68
PABPN1-202ENST00000397276 SPIRE2Q8WWL2 714 aa25.52■■□□□ 1.68
PABPN1-202ENST00000397276 KLRG1Q96E93 195 aa25.52■■□□□ 1.68
PABPN1-202ENST00000397276 IFT74Q96LB3 600 aa25.52■■□□□ 1.68
PABPN1-202ENST00000397276 MYCBPQ99417 103 aaPredicted RBP25.52■■□□□ 1.68
PABPN1-202ENST00000397276 ABHD15Q6UXT9 468 aa25.52■■□□□ 1.68
PABPN1-202ENST00000397276 MFSD14AQ96MC6 490 aa25.52■■□□□ 1.68
PABPN1-202ENST00000397276 NUP85Q9BW27 656 aa25.52■■□□□ 1.68
PABPN1-202ENST00000397276 ATP6V0A4Q9HBG4 840 aa25.52■■□□□ 1.68
PABPN1-202ENST00000397276 ADAMTS5Q9UNA0 930 aa25.52■■□□□ 1.68
PABPN1-202ENST00000397276 H0YHG0 523 aa25.51■■□□□ 1.67
PABPN1-202ENST00000397276 PDE6CP51160 858 aa25.51■■□□□ 1.67
PABPN1-202ENST00000397276 GPC3P51654 580 aa25.51■■□□□ 1.67
PABPN1-202ENST00000397276 UAP1Q16222 522 aaPredicted RBP25.51■■□□□ 1.67
PABPN1-202ENST00000397276 CNPY4Q8N129 248 aa25.51■■□□□ 1.67
PABPN1-202ENST00000397276 VTI1AQ96AJ9 217 aa25.51■■□□□ 1.67
PABPN1-202ENST00000397276 ZNF653Q96CK0 615 aa25.51■■□□□ 1.67
PABPN1-202ENST00000397276 SPDYE16A6NNV3 312 aaPredicted RBP25.51■■□□□ 1.67
PABPN1-202ENST00000397276 CLSTN1O94985 981 aa25.51■■□□□ 1.67
PABPN1-202ENST00000397276 ACOT2P49753 483 aa25.51■■□□□ 1.67
PABPN1-202ENST00000397276 POLGP54098 1239 aaPredicted RBP25.51■■□□□ 1.67
PABPN1-202ENST00000397276 POU5F1Q01860 360 aaKnown RBP25.51■■□□□ 1.67
PABPN1-202ENST00000397276 MCPH1Q8NEM0 835 aa25.51■■□□□ 1.67
PABPN1-202ENST00000397276 TTC7AQ9ULT0 858 aaPredicted RBP25.51■■□□□ 1.67
PABPN1-202ENST00000397276 MEFVO15553 781 aaPredicted RBP25.5■■□□□ 1.67
PABPN1-202ENST00000397276 CTNNA1P35221 906 aaKnown RBP25.5■■□□□ 1.67
PABPN1-202ENST00000397276 LIG4P49917 911 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 DR1Q01658 176 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 GNPTABQ3T906 1256 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 PDLIM7Q9NR12 457 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 TRPC6Q9Y210 931 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 DOCK5Q9H7D0 1870 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 C19orf81C9J6K1 198 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 UBL4BQ8N7F7 174 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 ZNF564Q8TBZ8 553 aaPredicted RBP25.5■■□□□ 1.67
PABPN1-202ENST00000397276 C18orf8Q96DM3 657 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 FBXL18Q96ME1 805 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 COQ4Q9Y3A0 265 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 COL11A1P12107 1806 aaPredicted RBP25.5■■□□□ 1.67
PABPN1-202ENST00000397276 GOLGA6L10A0A0M3HER8 536 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 TNNI1P19237 187 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 OAZ1P54368 228 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 WNT7BP56706 349 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 PTENP60484 403 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 C2CD6Q53TS8 623 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 MIS18BP1Q6P0N0 1132 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 ANKRD35Q8N283 1001 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 ZNF516Q92618 1163 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 HVCN1Q96D96 273 aa25.5■■□□□ 1.67
PABPN1-202ENST00000397276 ZBTB45Q96K62 511 aaPredicted RBP25.5■■□□□ 1.67
PABPN1-202ENST00000397276 DIS3Q9Y2L1 958 aaKnown RBP25.5■■□□□ 1.67
PABPN1-202ENST00000397276 SPATA31C2B4DYI2 1134 aa25.49■■□□□ 1.67
PABPN1-202ENST00000397276 PMM2O15305 246 aa25.49■■□□□ 1.67
PABPN1-202ENST00000397276 SPOPO43791 374 aa25.49■■□□□ 1.67
PABPN1-202ENST00000397276 KIAA0754O94854 1291 aa25.49■■□□□ 1.67
PABPN1-202ENST00000397276 BRDTQ58F21 947 aaPredicted RBP25.49■■□□□ 1.67
PABPN1-202ENST00000397276 RNF187Q5TA31 235 aaPredicted RBP25.49■■□□□ 1.67
PABPN1-202ENST00000397276 C17orf75Q9HAS0 396 aa25.49■■□□□ 1.67
PABPN1-202ENST00000397276 DKC1O60832 514 aaKnown RBP eCLIP25.49■■□□□ 1.67
PABPN1-202ENST00000397276 GZMAP12544 262 aa25.49■■□□□ 1.67
PABPN1-202ENST00000397276 NR1D1P20393 614 aa25.49■■□□□ 1.67
PABPN1-202ENST00000397276 ATP4AP20648 1035 aa25.49■■□□□ 1.67
PABPN1-202ENST00000397276 HPDP32754 393 aaPredicted RBP25.49■■□□□ 1.67
PABPN1-202ENST00000397276 TMC2Q8TDI7 906 aa25.49■■□□□ 1.67
PABPN1-202ENST00000397276 ZNF473Q8WTR7 871 aaKnown RBP25.49■■□□□ 1.67
PABPN1-202ENST00000397276 C12orf42Q96LP6 360 aa25.49■■□□□ 1.67
PABPN1-202ENST00000397276 ZSWIM1Q9BR11 485 aa25.49■■□□□ 1.67
PABPN1-202ENST00000397276 BCCIPQ9P287 314 aaKnown RBP eCLIP25.49■■□□□ 1.67
PABPN1-202ENST00000397276 CDR2Q01850 454 aa25.48■■□□□ 1.67
PABPN1-202ENST00000397276 DHX9Q08211 1270 aaKnown RBP25.48■■□□□ 1.67
PABPN1-202ENST00000397276 SPOPLQ6IQ16 392 aa25.48■■□□□ 1.67
PABPN1-202ENST00000397276 C11orf63Q6NUN7 778 aa25.48■■□□□ 1.67
PABPN1-202ENST00000397276 KDM7AQ6ZMT4 941 aa25.48■■□□□ 1.67
PABPN1-202ENST00000397276 B4GALNT4Q76KP1 1039 aa25.48■■□□□ 1.67
PABPN1-202ENST00000397276 LRRC45Q96CN5 670 aa25.48■■□□□ 1.67
PABPN1-202ENST00000397276 CDHR1Q96JP9 859 aa25.48■■□□□ 1.67
PABPN1-202ENST00000397276 NAP1L3Q99457 506 aaPredicted RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms