RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 TMBIM4Q9HC24 238 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 TBC1D22BQ9NU19 505 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 TMEM260Q9NX78 707 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 E7ENQ6 273 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 TDP2O95551 362 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 EYA4O95677 639 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 PAPOLAP51003 745 aaKnown RBP18.2■□□□□ 0.5
SIN3A-203ENST00000394949 ARHGDIAP52565 204 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 CDKL3Q8IVW4 592 aaPredicted RBP18.2■□□□□ 0.5
SIN3A-203ENST00000394949 SLC10A4Q96EP9 437 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 ANKZF1Q9H8Y5 726 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 RPF1Q9H9Y2 349 aaKnown RBP18.2■□□□□ 0.5
SIN3A-203ENST00000394949 SMARCAL1Q9NZC9 954 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 ADA2Q9NZK5 511 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 NDUFA13Q9P0J0 144 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 COL15A1P39059 1388 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 UBE4BO95155 1302 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 EMSYQ7Z589 1322 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 SYCE1LA8MT33 242 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 EEPD1Q7L9B9 569 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 ZBTB18Q99592 522 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 NPHS2Q9NP85 383 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 SLC9A2Q9UBY0 812 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 ARHGAP26Q9UNA1 814 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 CDC42BPGQ6DT37 1551 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 MAGEA13PA6NCF6 341 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 O00370 1275 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 C21orf2O43822 256 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 RCOR2Q8IZ40 523 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 FAM167AQ96KS9 214 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 DLGAP2Q9P1A6 1054 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 ZNF711Q9Y462 761 aa18.2■□□□□ 0.5
SIN3A-203ENST00000394949 KLRC1P26715 233 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 PTPAQ15257 358 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 KIF2BQ8N4N8 673 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 CELF1Q92879 486 aaKnown RBP18.19■□□□□ 0.5
SIN3A-203ENST00000394949 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.19■□□□□ 0.5
SIN3A-203ENST00000394949 UBN1Q9NPG3 1134 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 HOXC10Q9NYD6 342 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 KLHL2O95198 593 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 ENO1P06733 434 aaKnown RBP18.19■□□□□ 0.5
SIN3A-203ENST00000394949 GHRP10912 638 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 GNA15P30679 374 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 CASKIN2Q8WXE0 1202 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 GPR101Q96P66 508 aaPredicted RBP18.19■□□□□ 0.5
SIN3A-203ENST00000394949 POLD4Q9HCU8 107 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 MRGBPQ9NV56 204 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 SCP2P22307 547 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 KDSRQ06136 332 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 RCSD1Q6JBY9 416 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 BARGINQ6ZT62 677 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 RAPGEF5Q92565 580 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 THAP11Q96EK4 314 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 SLC13A1Q9BZW2 595 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 ATP6V0A4Q9HBG4 840 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 QRICH2Q9H0J4 1663 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 SNAP23O00161 211 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 SPAG6O75602 509 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 TRIM49P0CI25 452 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 TRIM49CP0CI26 452 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 BRD2P25440 801 aaKnown RBP18.19■□□□□ 0.5
SIN3A-203ENST00000394949 SCARA5Q6ZMJ2 495 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 SIX6OS1Q8N1H7 587 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 DONSONQ9NYP3 566 aa18.19■□□□□ 0.5
SIN3A-203ENST00000394949 FAM205CA6NFA0 338 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 USP17L15C9J2P7 530 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 USP17L13C9JLJ4 530 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 USP17L11C9JVI0 530 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 USP17L18D6R9N7 530 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 USP17L22D6RA61 530 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 USP17L17D6RBQ6 530 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 USP17L19D6RCP7 530 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 USP17L20D6RJB6 530 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 DNAJC6O75061 913 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 USP17L24Q0WX57 530 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 PPP6R3Q5H9R7 873 aaPredicted RBP18.18■□□□□ 0.5
SIN3A-203ENST00000394949 USP17L6PQ6QN14 398 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 LRRC34Q8IZ02 419 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 NEDD1Q8NHV4 660 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 CCDC134Q9H6E4 229 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 P4HBP07237 508 aaKnown RBP18.18■□□□□ 0.5
SIN3A-203ENST00000394949 SCARF1Q14162 830 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 KYNUQ16719 465 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 RHPN2Q8IUC4 686 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 PASD1Q8IV76 773 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 ARL8AQ96BM9 186 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 TBC1D23Q9NUY8 699 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 ZFXP17010 805 aaPredicted RBP18.18■□□□□ 0.5
SIN3A-203ENST00000394949 SLC29A2Q14542 456 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 CDO1Q16878 200 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 BTNL9Q6UXG8 535 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 TEKT4Q8WW24 435 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 NSL1Q96IY1 281 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 RMDN3Q96TC7 470 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 LRFN2Q9ULH4 789 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 ZBTB33Q86T24 672 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 CEP95Q96GE4 821 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 PLA2G12BQ9BX93 195 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 GTSE1Q9NYZ3 720 aa18.18■□□□□ 0.5
SIN3A-203ENST00000394949 KLHL8Q9P2G9 620 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms