RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ASAP2O43150 1006 aa19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 COILP38432 576 aaPredicted RBP19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 SIX1Q15475 284 aaPredicted RBP19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 SNCBQ16143 134 aa19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 ANGEL2Q5VTE6 544 aaKnown RBP19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 PRAMEF18Q5VWM3 479 aa19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 FAM228AQ86W67 206 aa19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 PLEKHO2Q8TD55 490 aa19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 CBWD1Q9BRT8 395 aa19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 DEFB129Q9H1M3 183 aa19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 NOCTQ9UK39 431 aaKnown RBP19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 P4HA2O15460 535 aa19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 SLCO1A2P46721 670 aa19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 CETN1Q12798 172 aa19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 TNFAIP8L3Q5GJ75 292 aa19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 PADI6Q6TGC4 694 aa19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 SLC13A5Q86YT5 568 aaPredicted RBP19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 EPS8L1Q8TE68 723 aa19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 ART4Q93070 314 aa19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 BTBD6Q96KE9 485 aa19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 INTS9Q9NV88 658 aaKnown RBP19.7■□□□□ 0.74
PCDHA1-202ENST00000394633 RARAP10276 462 aa19.69■□□□□ 0.74
PCDHA1-202ENST00000394633 TAX1BP1Q86VP1 789 aa19.69■□□□□ 0.74
PCDHA1-202ENST00000394633 ACER1Q8TDN7 264 aa19.69■□□□□ 0.74
PCDHA1-202ENST00000394633 MORC4Q8TE76 937 aa19.69■□□□□ 0.74
PCDHA1-202ENST00000394633 PRMT1Q99873 361 aaKnown RBP19.69■□□□□ 0.74
PCDHA1-202ENST00000394633 CCDC134Q9H6E4 229 aa19.69■□□□□ 0.74
PCDHA1-202ENST00000394633 TPX2Q9ULW0 747 aaKnown RBP19.69■□□□□ 0.74
PCDHA1-202ENST00000394633 PTPN22Q9Y2R2 807 aa19.69■□□□□ 0.74
PCDHA1-202ENST00000394633 DDX39AO00148 427 aaKnown RBP19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 IPO5O00410 1097 aaKnown RBP19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 RARGP13631 454 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 MAP2K2P36507 400 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 KCNJ1P48048 391 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 SF3A3Q12874 501 aaKnown RBP eCLIP19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 TRAF1Q13077 416 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 AUHQ13825 339 aaKnown RBP19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 TNFAIP1Q13829 316 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 SLMAPQ14BN4 828 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 CROCCP2Q86T23 111 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 TEX2Q8IWB9 1127 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 CCDC105Q8IYK2 499 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 ACP6Q9NPH0 428 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 ZBTB21Q9ULJ3 1066 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 FZD1Q9UP38 647 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 TBC1D12O60347 775 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 GZMAP12544 262 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 RDXP35241 583 aaKnown RBP19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 ITIH4Q14624 930 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 PREPLQ4J6C6 727 aaPredicted RBP19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 C12orf56Q8IXR9 622 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 FAM71AQ8IYT1 594 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 KREMEN1Q96MU8 473 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 RANBP17Q9H2T7 1088 aaKnown RBP19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 TMEM206Q9H813 350 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 EHMT1Q9H9B1 1298 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 GGA3Q9NZ52 723 aa19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.68■□□□□ 0.74
PCDHA1-202ENST00000394633 RASGRF2O14827 1237 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 NBPF12Q5TAG4 269 aaPredicted RBP19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 CYFIP1Q7L576 1253 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 SLC47A2Q86VL8 602 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 ANKS4BQ8N8V4 417 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 ZNF564Q8TBZ8 553 aaPredicted RBP19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 TMEM174Q8WUU8 243 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 ACCSQ96QU6 501 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 NUP85Q9BW27 656 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 TMEM117Q9H0C3 514 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 HSPBP1Q9NZL4 362 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 DBR1Q9UK59 544 aaKnown RBP19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 MTUS1Q9ULD2 1270 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 SYNPO2Q9UMS6 1093 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 PASKQ96RG2 1323 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 CYP26A1O43174 497 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 SPOPO43791 374 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 FMO1Q01740 532 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 MAP3K10Q02779 954 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 CCDC38Q502W7 563 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 GPATCH11Q8N954 259 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 XXYLT1Q8NBI6 393 aa19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 ELAC2Q9BQ52 826 aaKnown RBP19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 LARSQ9P2J5 1176 aaKnown RBP19.67■□□□□ 0.74
PCDHA1-202ENST00000394633 CYP1A2P05177 515 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 MAPTP10636 758 aaKnown RBP19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 CNGA2Q16280 664 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 ZNF568Q3ZCX4 644 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 DLK2Q6UY11 383 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 CCDC50Q8IVM0 306 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 C12orf50Q8NA57 414 aaPredicted RBP19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 RUNDC3BQ96NL0 473 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 POP1Q99575 1024 aaKnown RBP19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 GLIS2Q9BZE0 524 aaPredicted RBP19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 ARHGEF10LQ9HCE6 1279 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 MRPL11Q9Y3B7 192 aaKnown RBP19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 CAP2P40123 477 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 IFNAR2P48551 515 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 MXI1P50539 228 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 ALCAMQ13740 583 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 WLSQ5T9L3 541 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms