RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 PNMA3Q9UL41 463 aa8.35□□□□□ -1.07
GAPVD1-207ENST00000394105 SKAP2O75563 359 aaPredicted RBP8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 NPTX2P47972 431 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 GAD2Q05329 585 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 HIC1Q14526 733 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 PPP4R3CPQ6ZMV5 832 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 TXNRD2Q9NNW7 524 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 NKX1-2Q9UD57 310 aaPredicted RBP8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 TCP1P17987 556 aaKnown RBP8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 EXOC3L4Q17RC7 722 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 TMEM192Q8IY95 271 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 SENP7Q9BQF6 1050 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 STK33Q9BYT3 514 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 INTS2Q9H0H0 1204 aaKnown RBP8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 CCDC113Q9H0I3 377 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 DBR1Q9UK59 544 aaKnown RBP8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 EMSYQ7Z589 1322 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 ERLIN1O75477 346 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 CST3P01034 146 aaPredicted RBP8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 PTPRAP18433 802 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 EDNRBP24530 442 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 CHKAP35790 457 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 WDR72Q3MJ13 1102 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 CYB5D1Q6P9G0 228 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 DDX23Q9BUQ8 820 aaKnown RBP8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 ZNF341Q9BYN7 854 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 SUCLA2Q9P2R7 463 aaPredicted RBP8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 DNAJC12Q9UKB3 198 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 TTC3P53804 2025 aa8.34□□□□□ -1.07
GAPVD1-207ENST00000394105 GOLGA8KD6RF30 607 aa8.34□□□□□ -1.08
GAPVD1-207ENST00000394105 H0YIN7 160 aa8.34□□□□□ -1.08
GAPVD1-207ENST00000394105 C4BPAP04003 597 aaKnown RBP8.34□□□□□ -1.08
GAPVD1-207ENST00000394105 ZNF132P52740 706 aa8.34□□□□□ -1.08
GAPVD1-207ENST00000394105 MTMR2Q13614 643 aa8.34□□□□□ -1.08
GAPVD1-207ENST00000394105 RAPGEF1Q13905 1077 aa8.34□□□□□ -1.08
GAPVD1-207ENST00000394105 SPOPLQ6IQ16 392 aa8.34□□□□□ -1.08
GAPVD1-207ENST00000394105 EXOC3L1Q86VI1 746 aa8.34□□□□□ -1.08
GAPVD1-207ENST00000394105 MAP4K3Q8IVH8 894 aa8.34□□□□□ -1.08
GAPVD1-207ENST00000394105 EPS8L3Q8TE67 593 aaKnown RBP8.34□□□□□ -1.08
GAPVD1-207ENST00000394105 SPOCK2Q92563 424 aa8.34□□□□□ -1.08
GAPVD1-207ENST00000394105 GCNT3O95395 438 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 CYLC1P35663 651 aaPredicted RBP8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 ADAT2Q7Z6V5 191 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 CCDC125Q86Z20 511 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 DDX27Q96GQ7 796 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 RIT2Q99578 217 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 ARMCX3Q9UH62 379 aaPredicted RBP8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 SIGLEC16A6NMB1 481 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 PTENP60484 403 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 MAGOHP61326 146 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 CNTN2Q02246 1040 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 TDRD10Q5VZ19 366 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 C8orf74Q6P047 294 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 SLF2Q8IX21 1173 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 MAGOHBQ96A72 148 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 EBF2Q9HAK2 575 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 PPANQ9NQ55 473 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 KLC4Q9NSK0 619 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 ZNHIT6Q9NWK9 470 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 CYP39A1Q9NYL5 469 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 GGA2Q9UJY4 613 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 FOXN2P32314 431 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 MAEAQ7L5Y9 396 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 FITM2Q8N6M3 262 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 OR5B17Q8NGF7 314 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 RUBCNQ92622 972 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 MKNK1Q9BUB5 465 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 PARVGQ9HBI0 331 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 DDX39AO00148 427 aaKnown RBP8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 AKR1B10O60218 316 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 GCLMP48507 274 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 AMPD3Q01432 767 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 PADI6Q6TGC4 694 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 LEKR1Q6ZMV7 388 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 RDH13Q8NBN7 331 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 PRR11Q96HE9 360 aaPredicted RBP8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 ZNF577Q9BSK1 485 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 KATNBL1Q9H079 304 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 DNM3Q9UQ16 869 aa8.33□□□□□ -1.08
GAPVD1-207ENST00000394105 GSTTP1A0A1W2PQM5 241 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 NRLP54845 237 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 ENOX2Q16206 610 aaKnown RBP8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 GLE1Q53GS7 698 aaKnown RBP8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 FOXB2Q5VYV0 432 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 SAAL1Q96ER3 474 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 KCNK3O14649 394 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 GJB1P08034 283 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 YWHABP31946 246 aaKnown RBP8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 GJA5P36382 358 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 GTF2A1P52655 376 aaPredicted RBP8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 CEP85LQ5SZL2 805 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 NIPA1Q7RTP0 329 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 EHBP1Q8NDI1 1231 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 ASAP3Q8TDY4 903 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 STAMBPL1Q96FJ0 436 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 XYLT2Q9H1B5 865 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 MINDY3Q9H8M7 445 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 PTPRHQ9HD43 1115 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 HSPBP1Q9NZL4 362 aa8.32□□□□□ -1.08
GAPVD1-207ENST00000394105 ALG6Q9Y672 507 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms