RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 FAM84AQ96KN4 292 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 TARSL2A2RTX5 802 aaKnown RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 NTSR2O95665 410 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 HMBSP08397 361 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 LSP1P33241 339 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 AP3B2Q13367 1082 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 PRPSAP1Q14558 356 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 GIMAP8Q8ND71 665 aaPredicted RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 RFWD2Q8NHY2 731 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 SLC26A7Q8TE54 656 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 PARD3BQ8TEW8 1205 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 SLC10A4Q96EP9 437 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 TRIM56Q9BRZ2 755 aaKnown RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 OSBPL1AQ9BXW6 950 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 CNOT10Q9H9A5 744 aaKnown RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 ACP6Q9NPH0 428 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 KRT82Q9NSB4 513 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 AFF4Q9UHB7 1163 aaKnown RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 CROCC2H7BZ55 1655 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 PPRC1Q5VV67 1664 aaKnown RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 H0YCG3 227 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 PODXLO00592 558 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 MAP3K7O43318 606 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 RHOBTB3O94955 611 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 IRAK1P51617 712 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 GPC3P51654 580 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 YWHAHQ04917 246 aaPredicted RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 MCTP2Q6DN12 878 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 KIAA1841Q6NSI8 718 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 SZRD1Q7Z422 152 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 CRLF3Q8IUI8 442 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 FBXL13Q8NEE6 735 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 EPS8L3Q8TE67 593 aaKnown RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 FBXO41Q8TF61 875 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 SEMA6BQ9H3T3 888 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 ADA2Q9NZK5 511 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 V9GYQ6 96 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 LOC100653049A0A140TA62 436 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 ANO9A1A5B4 782 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 NVLO15381 856 aaKnown RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 PPP1R37O75864 691 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 KRT34O76011 436 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 RARBP10826 455 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 MDH1P40925 334 aaKnown RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 ARL4CP56559 192 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 PLCB4Q15147 1175 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 SNRNP35Q16560 246 aaKnown RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 HACE1Q8IYU2 909 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 CASKIN2Q8WXE0 1202 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 ZKSCAN4Q969J2 545 aaPredicted RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 KIF12Q96FN5 646 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 POLR3CQ9BUI4 534 aaPredicted RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 TRIM55Q9BYV6 548 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 CCSER1Q9C0I3 900 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 AP5M1Q9H0R1 490 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 ELP3Q9H9T3 547 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 KLC4Q9NSK0 619 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 TXLNGQ9NUQ3 528 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 ALG6Q9Y672 507 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 DFFAO00273 331 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 FOXN3O00409 490 aaPredicted RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 MED7O43513 233 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 BRD2P25440 801 aaKnown RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 CDC25CP30307 473 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 HERVK_113P62684 666 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 SPATS2Q86XZ4 545 aaKnown RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 OR6P1Q8NGX9 317 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 FAM20AQ96MK3 541 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 IQSEC2Q5JU85 1478 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 KIF3CO14782 793 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 WDR46O15213 610 aaKnown RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 GJB6O95452 261 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 APOEP02649 317 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 ITGA4P13612 1032 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 BCAR1P56945 870 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 DNAJC3Q13217 504 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 BIRC2Q13490 618 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 KIAA1755Q5JYT7 1200 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 FAM160B2Q86V87 743 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 RNF139Q8WU17 664 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 TRIM11Q96F44 468 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 RBM15Q96T37 977 aaKnown RBP eCLIP5.29□□□□□ -1.562e-6■■■□□ 15.6
LTN1-202ENST00000389194 TARS2Q9BW92 718 aaKnown RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 ALDH8A1Q9H2A2 487 aaPredicted RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 SLITRK6Q9H5Y7 841 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 APEX2Q9UBZ4 518 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 KAT6AQ92794 2004 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 A0A1W2PQC6 194 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 A8MXQ7 604 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 TISP43B9A030 160 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 SGPL1O95470 568 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 CIITAP33076 1130 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 EIF3BP55884 814 aaKnown RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 EIF3EP60228 445 aaKnown RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 PLIN5Q00G26 463 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 GRB10Q13322 594 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 SUPT20HL1Q3ZLR7 823 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 AADACL2Q6P093 401 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 PDZD4Q76G19 769 aaPredicted RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 PARP9Q8IXQ6 854 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms