RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 SMTNL2Q2TAL5 461 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 TTC8Q8TAM2 541 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 TJP2Q9UDY2 1190 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 HSPA6P17066 643 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 SLC8A1P32418 973 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 SLC25A41Q8N5S1 370 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 EPB41L4AQ9HCS5 686 aaPredicted RBP18.17■□□□□ 0.5
MCF2L-203ENST00000375604 L3MBTL1Q9Y468 752 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 UBE2Q2LH0YL09 131 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 CYP4A22Q5TCH4 519 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 MORC4Q8TE76 937 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 L3MBTL3Q96JM7 780 aaPredicted RBP18.17■□□□□ 0.5
MCF2L-203ENST00000375604 PARVAQ9NVD7 372 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 MAPK13O15264 365 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 ZNF543Q08ER8 600 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 ALS2CLQ60I27 953 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 HERC5Q9UII4 1024 aaKnown RBP18.17■□□□□ 0.5
MCF2L-203ENST00000375604 PVALEFA0A1B0GWK0 134 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 KBTBD13C9JR72 458 aa18.17■□□□□ 0.5
MCF2L-203ENST00000375604 HIBCHQ6NVY1 386 aaPredicted RBP18.17■□□□□ 0.5
MCF2L-203ENST00000375604 SYT2Q8N9I0 419 aaPredicted RBP18.17■□□□□ 0.5
MCF2L-203ENST00000375604 CNOT10Q9H9A5 744 aaKnown RBP18.17■□□□□ 0.5
MCF2L-203ENST00000375604 PODXLO00592 558 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 TADA3O75528 432 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 KRT37O76014 449 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 SPARCL1Q14515 664 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 NAALADL2Q58DX5 795 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 STRIP1Q5VSL9 837 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 EFCAB12Q6NXP0 572 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 TMEM117Q9H0C3 514 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 AMACRQ9UHK6 382 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 STAP1Q9ULZ2 295 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 CTIFO43310 598 aaKnown RBP18.16■□□□□ 0.5
MCF2L-203ENST00000375604 ORC4O43929 436 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 EYA4O95677 639 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 OR1G1P47890 313 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 USP11P51784 963 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 EIF3EP60228 445 aaKnown RBP18.16■□□□□ 0.5
MCF2L-203ENST00000375604 ZNF235Q14590 738 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 SPATS2Q86XZ4 545 aaKnown RBP18.16■□□□□ 0.5
MCF2L-203ENST00000375604 TXLNGQ9NUQ3 528 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 EPHA7Q15375 998 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 KRT80Q6KB66 452 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 PGBD3Q8N328 593 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 CAPN11Q9UMQ6 739 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 RALAP11233 206 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 TPI1P60174 286 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 IZUMO3Q5VZ72 239 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 IRX2Q9BZI1 471 aaPredicted RBP18.16■□□□□ 0.5
MCF2L-203ENST00000375604 MAP3K20Q9NYL2 800 aaKnown RBP18.16■□□□□ 0.5
MCF2L-203ENST00000375604 ZFP69BQ9UJL9 534 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 E2F6O75461 281 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 SCP2P22307 547 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 SNAPC2Q13487 334 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 MGAT5BQ3V5L5 792 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 PDXDC1Q6P996 788 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 SLC35G2Q8TBE7 412 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 OTULINQ96BN8 352 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 ERLEC1Q96DZ1 483 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 ZBTB18Q99592 522 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 CHP1Q99653 195 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 PHF20Q9BVI0 1012 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 TMEM106CQ9BVX2 250 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 TRIM4Q9C037 500 aa18.16■□□□□ 0.5
MCF2L-203ENST00000375604 IQCA1LA6NCM1 817 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 HNRNPCL2B2RXH8 293 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 HNRNPCL1O60812 293 aaKnown RBP18.15■□□□□ 0.5
MCF2L-203ENST00000375604 ATXN3P54252 364 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-203ENST00000375604 PRKCEQ02156 737 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 EMC2Q15006 297 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 IGDCC4Q8TDY8 1250 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 ADA2Q9NZK5 511 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 RNF14Q9UBS8 474 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 SPATA31A1Q5TZJ5 1347 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 CCL15-CCL14A0A0B4J2E2 113 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 CCL15Q16663 113 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 CC2D1AQ6P1N0 951 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-203ENST00000375604 TAAR1Q96RJ0 339 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 TULP4Q9NRJ4 1543 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 TMEM132DQ14C87 1099 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 GLRA4Q5JXX5 417 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 SUFUQ9UMX1 484 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 ZDHHC9Q9Y397 364 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 POLR1AO95602 1720 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-203ENST00000375604 NPTXRO95502 500 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 MUC3BQ9H195 1237 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 CYP26B1Q9NR63 512 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 APOBEC2Q9Y235 224 aaKnown RBP18.15■□□□□ 0.5
MCF2L-203ENST00000375604 CROCC2H7BZ55 1655 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 PLEKHG2Q9H7P9 1386 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 STXBP3O00186 592 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 IL31Q6EBC2 164 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 MMS22LQ6ZRQ5 1243 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 TRIM51Q9BSJ1 452 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 AGPAT5Q9NUQ2 364 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 IQGAP3Q86VI3 1631 aa18.15■□□□□ 0.5
MCF2L-203ENST00000375604 LIMA1Q9UHB6 759 aaKnown RBP18.14■□□□□ 0.5
MCF2L-203ENST00000375604 CLCA2Q9UQC9 943 aa18.14■□□□□ 0.5
MCF2L-203ENST00000375604 TFDP2Q14188 446 aa18.14■□□□□ 0.49
MCF2L-203ENST00000375604 PAN2Q504Q3 1202 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms