RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 hCG_2014768A0A024R1R8 64 aa21.95■■□□□ 1.11
TMEFF1-201ENST00000374879 NPHP3-ACAD11A0A0J9YXS1 232 aa21.95■■□□□ 1.11
TMEFF1-201ENST00000374879 SPAG7O75391 227 aa21.95■■□□□ 1.11
TMEFF1-201ENST00000374879 TTC4O95801 387 aa21.95■■□□□ 1.11
TMEFF1-201ENST00000374879 NR2F2P24468 414 aa21.95■■□□□ 1.11
TMEFF1-201ENST00000374879 NAPAP54920 295 aa21.95■■□□□ 1.11
TMEFF1-201ENST00000374879 DEUP1Q05D60 604 aa21.95■■□□□ 1.11
TMEFF1-201ENST00000374879 ZNF365Q70YC5 407 aa21.95■■□□□ 1.11
TMEFF1-201ENST00000374879 ANKRD23Q86SG2 305 aa21.95■■□□□ 1.11
TMEFF1-201ENST00000374879 TXNRD3Q86VQ6 643 aa21.95■■□□□ 1.11
TMEFF1-201ENST00000374879 TRIM42Q8IWZ5 723 aa21.95■■□□□ 1.11
TMEFF1-201ENST00000374879 THAP2Q9H0W7 228 aa21.95■■□□□ 1.11
TMEFF1-201ENST00000374879 CPVLQ9H3G5 476 aa21.95■■□□□ 1.11
TMEFF1-201ENST00000374879 PCDHA2Q9Y5H9 948 aa21.95■■□□□ 1.11
TMEFF1-201ENST00000374879 PASKQ96RG2 1323 aa21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 LAMB1P07942 1786 aa21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 POTEFA5A3E0 1075 aa21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 POTEIP0CG38 1075 aa21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 POTEJP0CG39 1038 aa21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 TFAP4Q01664 338 aa21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 DCAF17Q5H9S7 520 aaPredicted RBP21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 POTEEQ6S8J3 1075 aa21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 DZIP1Q86YF9 867 aaKnown RBP21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 CCDC125Q86Z20 511 aa21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 WDR60Q8WVS4 1066 aa21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 HIC2Q96JB3 615 aa21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 LRRC27Q9C0I9 530 aa21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 ASCC2Q9H1I8 757 aaPredicted RBP21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 STX18Q9P2W9 335 aaKnown RBP21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 WASF2Q9Y6W5 498 aa21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 SPATA31A5Q5VU36 1347 aa21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 SPATA31A7Q8IWB4 1347 aa21.95■■□□□ 1.1
TMEFF1-201ENST00000374879 KDM4FA0A1W2PPD8 638 aa21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 SMCO2A6NFE2 343 aa21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 ASMTLO95671 621 aa21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 HOXA7P31268 230 aaPredicted RBP21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 EPHA7Q15375 998 aa21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 RBM26Q5T8P6 1007 aaKnown RBP21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 MTDHQ86UE4 582 aaKnown RBP21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 ANKRD2Q9GZV1 360 aa21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 EMILIN3Q9NT22 766 aa21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 LARSQ9P2J5 1176 aaKnown RBP21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 FAM47DPA6NHR8 397 aa21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 PFDN1O60925 122 aa21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 HSPA6P17066 643 aa21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 CHRNB2P17787 502 aa21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 CTC1Q2NKJ3 1217 aa21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 CEP128Q6ZU80 1094 aa21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 DYDC2Q96IM9 177 aa21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 DDX43Q9NXZ2 648 aaKnown RBP21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 TAS2R14Q9NYV8 317 aa21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 BIN2Q9UBW5 565 aaPredicted RBP21.94■■□□□ 1.1
TMEFF1-201ENST00000374879 GSC2O15499 205 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 EXOC3O60645 756 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 FXR2P51116 673 aaKnown RBP eCLIP21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 GRM4Q14833 912 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 KRT79Q5XKE5 535 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 PRUNE1Q86TP1 453 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 ZC3H3Q8IXZ2 948 aaKnown RBP21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 SYNCQ9H7C4 482 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 IL17RBQ9NRM6 502 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 GRID1Q9ULK0 1009 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 KIF13BQ9NQT8 1826 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 NRAPQ86VF7 1730 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 TMEM110-MUSTN1A8MSY1 372 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 SLC37A4O43826 429 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 EDF1O60869 148 aaKnown RBP21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 DESP17661 470 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 TMEM119Q4V9L6 283 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 SETDB2Q96T68 719 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 CENPKQ9BS16 269 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 HSFX1Q9UBD0 423 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 KIAA1551Q9HCM1 1747 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 RASA4BC9J798 803 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 RASA4O43374 803 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 GOLGA8HP0CJ92 632 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 HERC4Q5GLZ8 1057 aaPredicted RBP21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 TCERG1LQ5VWI1 586 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 NLRP9Q7RTR0 991 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 CLNKQ7Z7G1 428 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 DYNLL2Q96FJ2 89 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 PWWP2AQ96N64 755 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 BTBD10Q9BSF8 475 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 NYXQ9GZU5 481 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 TMEM260Q9NX78 707 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 SRP68Q9UHB9 627 aaKnown RBP21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 LGALS13Q9UHV8 139 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 SUGT1Q9Y2Z0 365 aa21.93■■□□□ 1.1
TMEFF1-201ENST00000374879 AHDC1Q5TGY3 1603 aaPredicted RBP21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 A6NJR5 290 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 THAP12O43422 761 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 CDK7P50613 346 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 SFSWAPQ12872 951 aaKnown RBP21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 TMEM266Q2M3C6 531 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 STMN2Q93045 179 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 UBN1Q9NPG3 1134 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 ZNF212Q9UDV6 495 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 GMEB1Q9Y692 573 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 A0A1W2PRG0 241 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 PALM3A6NDB9 673 aaPredicted RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms