RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 SERPINB6P35237 376 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 HERVK_113P62684 666 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 EPHA7Q15375 998 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 AMHR2Q16671 573 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 TUBB8Q3ZCM7 444 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 MDH1BQ5I0G3 518 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 RINT1Q6NUQ1 792 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 PDIK1LQ8N165 341 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 VGLL2Q8N8G2 317 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 SKA2Q8WVK7 121 aaPredicted RBP9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 PSPC1Q8WXF1 523 aaKnown RBP9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 ANKS1AQ92625 1134 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 FAF2Q96CS3 445 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 FEM1BQ9UK73 627 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 CCDC188H7C350 402 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 PDXKO00764 312 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 EPHB6O15197 1021 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 ITGA4P13612 1032 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 NCF2P19878 526 aaPredicted RBP9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 PDIA2Q13087 525 aaKnown RBP9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 TFDP1Q14186 410 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 RPS6KA2Q15349 733 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 FAM102AQ5T9C2 384 aaPredicted RBP9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 TRIM65Q6PJ69 517 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 PDCD7Q8N8D1 485 aaKnown RBP9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 SPATA33Q96N06 139 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 FUT8Q9BYC5 575 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 DEFB129Q9H1M3 183 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 TBC1D22BQ9NU19 505 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 FAM49BQ9NUQ9 324 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 TCHHQ07283 1943 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 A0A087WUV0 522 aaPredicted RBP9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 H0YCG3 227 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 GIPC1O14908 333 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 ADRA2BP18089 450 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 KRT17Q04695 432 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 TWF2Q6IBS0 349 aaKnown RBP9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 SPOPLQ6IQ16 392 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 TMEM35BQ8NCS4 154 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 CDHR1Q96JP9 859 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 VCPKMTQ9H867 229 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 KBTBD4Q9NVX7 518 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 MARCOQ9UEW3 520 aaPredicted RBP9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 PLAGL2Q9UPG8 496 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 GOLGB1Q14789 3259 aaKnown RBP9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 MOCS2O96007 188 aaPredicted RBP9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 RARBP10826 455 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 GUCY2CP25092 1073 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 RPA1P27694 616 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 CASP2P42575 452 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 NME3Q13232 169 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 FAXCQ5TGI0 409 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 ARHGEF18Q6ZSZ5 1173 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 MCPH1Q8NEM0 835 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 PPP4R1Q8TF05 950 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 SCFD1Q8WVM8 642 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 MTRQ99707 1265 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 FAM167BQ9BTA0 163 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 JPH1Q9HDC5 661 aaPredicted RBP9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 GGA3Q9NZ52 723 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 APEX2Q9UBZ4 518 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 ANAPC4Q9UJX5 808 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 BCORQ6W2J9 1755 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 CASZ1Q86V15 1759 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 PXDNLA1KZ92 1463 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 SH3BP5O60239 455 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 SASH3O75995 380 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 STAT5BP51692 787 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 KRT76Q01546 638 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 SNCBQ16143 134 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 KCNT1Q5JUK3 1230 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 HABP4Q5JVS0 413 aaKnown RBP9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 CYP4A22Q5TCH4 519 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 KLHDC7AQ5VTJ3 777 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 TEX2Q8IWB9 1127 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 SCN4BQ8IWT1 228 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 SLC20A1Q8WUM9 679 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 CRAMP1Q96RY5 1269 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 SLC9A2Q9UBY0 812 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 NAGPAQ9UK23 515 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 UBE4BO95155 1302 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 PDS5AQ29RF7 1337 aaKnown RBP9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 KNL1Q8NG31 2342 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 PGK2P07205 417 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 CTSHP09668 335 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 SOX11P35716 441 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 RNASELQ05823 741 aaKnown RBP9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 GLRA4Q5JXX5 417 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 SH2D4BQ5SQS7 431 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 IZUMO3Q5VZ72 239 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 CROCCP2Q86T23 111 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 L2HGDHQ9H9P8 463 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 IFT122Q9HBG6 1241 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 HPCAL4Q9UM19 191 aa9.69□□□□□ -0.86
SMARCA1-202ENST00000371122 HMGB1P1B2RPK0 211 aaPredicted RBP9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 KRT10P13645 584 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 GBP1P32455 592 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 CIITAP33076 1130 aa9.68□□□□□ -0.86
SMARCA1-202ENST00000371122 RASSF2P50749 326 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms