RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SCN10AQ9Y5Y9 1956 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 SMIM35A0A1B0GVV1 85 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 ZNF233A6NK53 670 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 EPHB6O15197 1021 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 CLDN3O15551 220 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 NOL4O94818 638 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 EDN1P05305 212 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 ADRB2P07550 413 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 PON1P27169 355 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 MBTD1Q05BQ5 628 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 CYP24A1Q07973 514 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 NOLC1Q14978 699 aaKnown RBP eCLIP13.09□□□□□ -0.31
USF1-203ENST00000368021 CYP26C1Q6V0L0 522 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 TSHZ1Q6ZSZ6 1077 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 PARD3BQ8TEW8 1205 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 ACO2Q99798 780 aaKnown RBP13.09□□□□□ -0.31
USF1-203ENST00000368021 CRACR2AQ9BSW2 395 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 LSM14BQ9BX40 385 aaKnown RBP13.09□□□□□ -0.31
USF1-203ENST00000368021 PRMT7Q9NVM4 692 aaPredicted RBP13.09□□□□□ -0.31
USF1-203ENST00000368021 GCNT4Q9P109 453 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 PLAGL2Q9UPG8 496 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 DAAM1Q9Y4D1 1078 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 GOLGA8IPA6NC78 632 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 GOLGA8JA6NMD2 632 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 VGLL3A8MV65 326 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 INO80B-WBP1J3KQ70 363 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 PQBP1O60828 265 aaKnown RBP13.09□□□□□ -0.31
USF1-203ENST00000368021 TRIM49P0CI25 452 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 TRIM49CP0CI26 452 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 GNAT1P11488 350 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 SYN1P17600 705 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 GTF2H1P32780 548 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 GPC3P51654 580 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 CDK17Q00537 523 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 CETN1Q12798 172 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 TRIM60Q495X7 471 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 C1orf220Q5T0J3 134 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 DPY19L2P1Q6NXN4 242 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 BAP1Q92560 729 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 MTG1Q9BT17 334 aaPredicted RBP13.09□□□□□ -0.31
USF1-203ENST00000368021 MSTO1Q9BUK6 570 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 INO80BQ9C086 356 aaPredicted RBP13.09□□□□□ -0.31
USF1-203ENST00000368021 GANQ9H2C0 597 aa13.09□□□□□ -0.31
USF1-203ENST00000368021 A0A087WZ62 844 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 VTNP04004 478 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 PROZP22891 400 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 DLG4P78352 724 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 CLDN10P78369 228 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 MYL7Q01449 175 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 MCL1Q07820 350 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 PRPF4BQ13523 1007 aaKnown RBP13.08□□□□□ -0.32
USF1-203ENST00000368021 CBWD6Q4V339 395 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 CBWD3Q5JTY5 395 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 CBWD5Q5RIA9 395 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 KLHDC7AQ5VTJ3 777 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 CACNA2D4Q7Z3S7 1137 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 SRGAP1Q7Z6B7 1085 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 KRT222Q8N1A0 295 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 PLEKHO2Q8TD55 490 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 SYN2Q92777 582 aaPredicted RBP13.08□□□□□ -0.32
USF1-203ENST00000368021 ZBTB45Q96K62 511 aaPredicted RBP13.08□□□□□ -0.32
USF1-203ENST00000368021 FDXACB1Q9BRP7 624 aaPredicted RBP13.08□□□□□ -0.32
USF1-203ENST00000368021 FAM213AQ9BRX8 229 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 HAPLN2Q9GZV7 340 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 MINDY3Q9H8M7 445 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 PTPRHQ9HD43 1115 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 ZNHIT6Q9NWK9 470 aaKnown RBP13.08□□□□□ -0.32
USF1-203ENST00000368021 ANKFY1Q9P2R3 1169 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 ZMYND8Q9ULU4 1186 aaPredicted RBP13.08□□□□□ -0.32
USF1-203ENST00000368021 MYO6Q9UM54 1294 aa13.08□□□□□ -0.32
USF1-203ENST00000368021 C17orf102A2RUQ5 167 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 ABLIM1O14639 778 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 CCP110O43303 1012 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 UCHL3P15374 230 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 SLC9A1P19634 815 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 TNNT3P45378 269 aaPredicted RBP13.07□□□□□ -0.32
USF1-203ENST00000368021 TLE2Q04725 743 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 PPP3CAQ08209 521 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 ITGA7Q13683 1181 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 PSMD6Q15008 389 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 PCBP1Q15365 356 aaKnown RBP eCLIP13.07□□□□□ -0.32
USF1-203ENST00000368021 E4F1Q66K89 784 aaPredicted RBP13.07□□□□□ -0.32
USF1-203ENST00000368021 TRIM65Q6PJ69 517 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 WDR59Q6PJI9 974 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 GOLGA6L1Q8N7Z2 621 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 C7orf31Q8N865 590 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 NLRP7Q8WX94 980 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 TNFSF13BQ9Y275 285 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 USP20Q9Y2K6 914 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 GRIN2DO15399 1336 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 CNTNAP2Q9UHC6 1331 aa13.07□□□□□ -0.32
USF1-203ENST00000368021 SOWAHDA6NJG2 315 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 TTLL13PA6NNM8 815 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 LRRIQ3A6PVS8 624 aaPredicted RBP13.06□□□□□ -0.32
USF1-203ENST00000368021 H0YGN5 161 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 FAM189A1O60320 539 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 IQCF3P0C7M6 154 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 CYP2C9P11712 490 aa13.06□□□□□ -0.32
USF1-203ENST00000368021 RFX1P22670 979 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms