RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 IYDQ6PHW0 289 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 TPH2Q8IWU9 490 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 FAM178BQ8IXR5 827 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 SYNE4Q8N205 404 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.63■□□□□ 0.41
PACS1-201ENST00000320580 ZNF564Q8TBZ8 553 aaPredicted RBP17.63■□□□□ 0.41
PACS1-201ENST00000320580 PIGSQ96S52 555 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 WNT8AQ9H1J5 351 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 ANAPC7Q9UJX3 599 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 NOP56O00567 594 aaKnown RBP17.62■□□□□ 0.41
PACS1-201ENST00000320580 COPEO14579 308 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 GIPC1O14908 333 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 KDM1AO60341 852 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 PGM3O95394 542 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 NUDT17P0C025 328 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 PPIDQ08752 370 aaKnown RBP17.62■□□□□ 0.41
PACS1-201ENST00000320580 DNAL1Q4LDG9 190 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 OLFML1Q6UWY5 402 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 TRIM67Q6ZTA4 783 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 CCDC127Q96BQ5 260 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 HAUS8Q9BT25 410 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 SH3GLB2Q9NR46 395 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 PCDHA6Q9UN73 950 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 PCDHA8Q9Y5H6 950 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 NR3C1P04150 777 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 TMEM259Q4ZIN3 620 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 NANOGNBQ7Z5D8 188 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 PIGBQ92521 554 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 RNF25Q96BH1 459 aaPredicted RBP17.62■□□□□ 0.41
PACS1-201ENST00000320580 LENG1Q96BZ8 264 aaPredicted RBP17.62■□□□□ 0.41
PACS1-201ENST00000320580 FAM118BQ9BPY3 351 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 CES2O00748 559 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 XPO1O14980 1071 aaKnown RBP17.62■□□□□ 0.41
PACS1-201ENST00000320580 MLH1P40692 756 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 SKIV2L2P42285 1042 aaKnown RBP17.62■□□□□ 0.41
PACS1-201ENST00000320580 PDIA2Q13087 525 aaKnown RBP17.62■□□□□ 0.41
PACS1-201ENST00000320580 PRR16Q569H4 304 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 TTC25Q96NG3 672 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 MKNK1Q9BUB5 465 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 NUP85Q9BW27 656 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 ZWILCHQ9H900 591 aa17.62■□□□□ 0.41
PACS1-201ENST00000320580 COMTP21964 271 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 MRPS9P82933 396 aaKnown RBP17.61■□□□□ 0.41
PACS1-201ENST00000320580 DCTN2Q13561 401 aaKnown RBP17.61■□□□□ 0.41
PACS1-201ENST00000320580 NXNQ6DKJ4 435 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 TTBK2Q6IQ55 1244 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 MAPKAPK5Q8IW41 473 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 SCUBE1Q8IWY4 988 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 ASAP3Q8TDY4 903 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 DENND2DQ9H6A0 471 aaPredicted RBP17.61■□□□□ 0.41
PACS1-201ENST00000320580 MTO1Q9Y2Z2 717 aaKnown RBP17.61■□□□□ 0.41
PACS1-201ENST00000320580 SFI1A8K8P3 1242 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 KIAA0895Q8NCT3 520 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 ZFAND2BQ8WV99 257 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 TLCD1Q96CP7 247 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 ZNF212Q9UDV6 495 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 ZBTB21Q9ULJ3 1066 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 CCNFP41002 786 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 USP17L2Q6R6M4 530 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 CYFIP1Q7L576 1253 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 MAK16Q9BXY0 300 aaKnown RBP17.61■□□□□ 0.41
PACS1-201ENST00000320580 NPHP3-ACAD11A0A0J9YXS1 232 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 IQANK1A0A1B0GTG1 560 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 TMEM253P0C7T8 217 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 VAV1P15498 845 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 HNRNPH3P31942 346 aaKnown RBP17.61■□□□□ 0.41
PACS1-201ENST00000320580 MAGEA4P43358 317 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 KIF22Q14807 665 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 SFR1Q86XK3 245 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 ECHDC2Q86YB7 292 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 ANKMY2Q8IV38 441 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 WDR75Q8IWA0 830 aaKnown RBP17.61■□□□□ 0.41
PACS1-201ENST00000320580 ATP2A3Q93084 1043 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 ASCC2Q9H1I8 757 aaPredicted RBP17.61■□□□□ 0.41
PACS1-201ENST00000320580 SLCO1B3Q9NPD5 702 aa17.61■□□□□ 0.41
PACS1-201ENST00000320580 ZMYND8Q9ULU4 1186 aaPredicted RBP17.61■□□□□ 0.41
PACS1-201ENST00000320580 NIP7Q9Y221 180 aaKnown RBP eCLIP17.61■□□□□ 0.41
PACS1-201ENST00000320580 USP17L3A6NCW0 530 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 USP17L4A6NCW7 530 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 STAT2P52630 851 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 CBX3Q13185 183 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 PDIA6Q15084 440 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 PKN1Q16512 942 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 KBTBD12Q3ZCT8 623 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 RARS2Q5T160 578 aaKnown RBP17.6■□□□□ 0.41
PACS1-201ENST00000320580 USP17L1Q7RTZ2 530 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 GALNT4Q8N4A0 578 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 TTC4O95801 387 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 GALK1P51570 392 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 LIN52Q52LA3 116 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 CASC4Q6P4E1 433 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 CASP10Q92851 521 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 WWP1Q9H0M0 922 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 ATP8A2Q9NTI2 1148 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 TFCP2L1Q9NZI6 479 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 APOBEC2Q9Y235 224 aaKnown RBP17.6■□□□□ 0.41
PACS1-201ENST00000320580 WNT7AO00755 349 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 APOEP02649 317 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 IMPDH2P12268 514 aa17.6■□□□□ 0.41
PACS1-201ENST00000320580 HOXA7P31268 230 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms