RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 ATP2B1P20020 1258 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 GNL2Q13823 731 aaKnown RBP9.29□□□□□ -0.92
MSL3-201ENST00000312196 NAB2Q15742 525 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 IER5LQ5T953 404 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 ALKAL1Q6UXT8 129 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 RSPO2Q6UXX9 243 aaPredicted RBP9.29□□□□□ -0.92
MSL3-201ENST00000312196 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.29□□□□□ -0.92
MSL3-201ENST00000312196 C1orf186Q6ZWK4 172 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 RBM23Q86U06 439 aaKnown RBP9.29□□□□□ -0.92
MSL3-201ENST00000312196 CCDC105Q8IYK2 499 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 PIGOQ8TEQ8 1089 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 PIK3R5Q8WYR1 880 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 ATOH1Q92858 354 aaPredicted RBP9.29□□□□□ -0.92
MSL3-201ENST00000312196 ZNF668Q96K58 619 aaPredicted RBP9.29□□□□□ -0.92
MSL3-201ENST00000312196 TBC1D32Q96NH3 1257 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 POMKQ9H5K3 350 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 DNAJB4Q9UDY4 337 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 PCDHGC5Q9Y5F6 944 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 BACE2Q9Y5Z0 518 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 PLXNA3P51805 1871 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 PER2O15055 1255 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 B4GALT3O60512 393 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 CSDE1O75534 798 aaKnown RBP9.28□□□□□ -0.92
MSL3-201ENST00000312196 NPTXRO95502 500 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 VCPP55072 806 aaKnown RBP9.28□□□□□ -0.92
MSL3-201ENST00000312196 PTGDRQ13258 359 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 TDGQ13569 410 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 HSP90AA2PQ14568 343 aaPredicted RBP9.28□□□□□ -0.92
MSL3-201ENST00000312196 NT5DC1Q5TFE4 455 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 DCLRE1AQ6PJP8 1040 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 ZPBP2Q6X784 338 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 TRMT1LQ7Z2T5 733 aaKnown RBP9.28□□□□□ -0.92
MSL3-201ENST00000312196 SYT2Q8N9I0 419 aaPredicted RBP9.28□□□□□ -0.92
MSL3-201ENST00000312196 STAMQ92783 540 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 GAD1Q99259 594 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 SH2D3AQ9BRG2 576 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 TRIM6Q9C030 488 aaPredicted RBP9.28□□□□□ -0.92
MSL3-201ENST00000312196 MIOSQ9NXC5 875 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 SF3B1O75533 1304 aaKnown RBP eCLIP9.28□□□□□ -0.929e-7■■■■■ 57.4
MSL3-201ENST00000312196 SPTBN5Q9NRC6 3674 aaKnown RBP9.28□□□□□ -0.92
MSL3-201ENST00000312196 PRR23AA6NEV1 266 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 MEIS3P2A8K0S8 358 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 PIGRP01833 764 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 ADRB2P07550 413 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 CNPP09543 421 aaKnown RBP9.28□□□□□ -0.92
MSL3-201ENST00000312196 AOC1P19801 751 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 RPL9P32969 192 aaKnown RBP9.28□□□□□ -0.92
MSL3-201ENST00000312196 UVSSAQ2YD98 709 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 FUT10Q6P4F1 479 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 POTEGQ6S5H5 508 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 CABP7Q86V35 215 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 TMEM173Q86WV6 379 aaPredicted RBP9.28□□□□□ -0.92
MSL3-201ENST00000312196 BSNDQ8WZ55 320 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 TMX3Q96JJ7 454 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 MMTAG2Q9BU76 263 aaKnown RBP9.28□□□□□ -0.92
MSL3-201ENST00000312196 MRPL4Q9BYD3 311 aaKnown RBP9.28□□□□□ -0.92
MSL3-201ENST00000312196 RNF39Q9H2S5 420 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 PLEKHA5Q9HAU0 1116 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 SLC38A7Q9NVC3 462 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 ADAM28Q9UKQ2 775 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 ODF2LQ9ULJ1 636 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 INPP5FQ9Y2H2 1132 aa9.28□□□□□ -0.92
MSL3-201ENST00000312196 PDCD11Q14690 1871 aaKnown RBP9.27□□□□□ -0.92
MSL3-201ENST00000312196 LRRIQ4A6NIV6 560 aa9.27□□□□□ -0.92
MSL3-201ENST00000312196 MICAL2O94851 1124 aa9.27□□□□□ -0.92
MSL3-201ENST00000312196 MAPTP10636 758 aaKnown RBP9.27□□□□□ -0.92
MSL3-201ENST00000312196 FGFR3P22607 806 aa9.27□□□□□ -0.92
MSL3-201ENST00000312196 MAPK7Q13164 816 aa9.27□□□□□ -0.92
MSL3-201ENST00000312196 SNX29Q8TEQ0 813 aa9.27□□□□□ -0.92
MSL3-201ENST00000312196 CPB2Q96IY4 423 aa9.27□□□□□ -0.92
MSL3-201ENST00000312196 PPP1R10Q96QC0 940 aaKnown RBP9.27□□□□□ -0.92
MSL3-201ENST00000312196 ACO2Q99798 780 aaKnown RBP9.27□□□□□ -0.92
MSL3-201ENST00000312196 OSBPL6Q9BZF3 934 aa9.27□□□□□ -0.92
MSL3-201ENST00000312196 ST6GALNAC4Q9H4F1 302 aa9.27□□□□□ -0.92
MSL3-201ENST00000312196 SLC2A4RGQ9NR83 387 aa9.27□□□□□ -0.92
MSL3-201ENST00000312196 ABLIM1O14639 778 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 GLUD1P00367 558 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 THP07101 528 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 PDCP20941 246 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 KLRC2P26717 231 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 LONP1P36776 959 aaKnown RBP9.27□□□□□ -0.93
MSL3-201ENST00000312196 MLH1P40692 756 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 SCNN1GP51170 649 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 RAB33AQ14088 237 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 IL17AQ16552 155 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 ECM1Q16610 540 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 ATF7IP2Q5U623 682 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 RINT1Q6NUQ1 792 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 CCDC149Q6ZUS6 474 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 ZBTB33Q86T24 672 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 TMEM87AQ8NBN3 555 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 INTS4Q96HW7 963 aaKnown RBP9.27□□□□□ -0.93
MSL3-201ENST00000312196 NXF3Q9H4D5 531 aaKnown RBP9.27□□□□□ -0.93
MSL3-201ENST00000312196 WDR6Q9NNW5 1121 aaKnown RBP9.27□□□□□ -0.93
MSL3-201ENST00000312196 DDX19AQ9NUU7 478 aaKnown RBP9.27□□□□□ -0.93
MSL3-201ENST00000312196 KCNH3Q9ULD8 1083 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 KIAA1024Q9UPX6 916 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 PCDHB6Q9Y5E3 794 aa9.27□□□□□ -0.93
MSL3-201ENST00000312196 CHD7Q9P2D1 2997 aa9.26□□□□□ -0.93
MSL3-201ENST00000312196 PTGESO14684 152 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms