RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 MMEP08473 750 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 PDGFRBP09619 1106 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 PID1Q7Z2X4 250 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 ATXN7L3BQ96GX2 97 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 AGPAT1Q99943 283 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 APOBEC2Q9Y235 224 aaKnown RBP18.31■□□□□ 0.52
SHANK1-201ENST00000293441 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.31■□□□□ 0.52
SHANK1-201ENST00000293441 ZFXP17010 805 aaPredicted RBP18.31■□□□□ 0.52
SHANK1-201ENST00000293441 EMBQ6PCB8 327 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 NUDT18Q6ZVK8 323 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 SEPT1Q8WYJ6 367 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 TRIM55Q9BYV6 548 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 XAB2Q9HCS7 855 aaKnown RBP18.31■□□□□ 0.52
SHANK1-201ENST00000293441 RPS6KA5O75582 802 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 TAP1Q03518 808 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 PLA2G4FQ68DD2 849 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 SAMD7Q7Z3H4 446 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 SYT2Q8N9I0 419 aaPredicted RBP18.31■□□□□ 0.52
SHANK1-201ENST00000293441 TTC26A0AVF1 554 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 KRT80Q6KB66 452 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 ZBED8Q8IZ13 594 aa18.31■□□□□ 0.52
SHANK1-201ENST00000293441 DGAT1O75907 488 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 CYTH2Q99418 400 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 CFAP69A5D8W1 941 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 RABL6Q3YEC7 729 aaPredicted RBP18.3■□□□□ 0.52
SHANK1-201ENST00000293441 C16orf86Q6ZW13 317 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 TIPINQ9BVW5 301 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 IFNA8P32881 189 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 HHIPL2Q6UWX4 724 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 FAM47EQ6ZV65 393 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 SEPT5Q99719 369 aaPredicted RBP18.3■□□□□ 0.52
SHANK1-201ENST00000293441 HUNKP57058 714 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 VCPKMTQ9H867 229 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 MLXIPLQ9NP71 852 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 ABCA6Q8N139 1617 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 PRRG1O14668 218 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 PRPF4O43172 522 aaKnown RBP eCLIP18.3■□□□□ 0.52
SHANK1-201ENST00000293441 ALDH1A1P00352 501 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 RBP5P82980 135 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 CDC42EP1Q00587 391 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 PTK2BQ14289 1009 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 PDCD2Q16342 344 aaPredicted RBP18.3■□□□□ 0.52
SHANK1-201ENST00000293441 DHX40Q8IX18 779 aaKnown RBP18.3■□□□□ 0.52
SHANK1-201ENST00000293441 EPAS1Q99814 870 aa18.3■□□□□ 0.52
SHANK1-201ENST00000293441 A0A087WUV0 522 aaPredicted RBP18.29■□□□□ 0.52
SHANK1-201ENST00000293441 PDIA5Q14554 519 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 TADA2BQ86TJ2 420 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 SLC30A5Q8TAD4 765 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 CPA5Q8WXQ8 436 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 REEP2Q9BRK0 252 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 HSD17B4P51659 736 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 EMC2Q15006 297 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 SYCP2LQ5T4T6 812 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 SH3TC2Q8TF17 1288 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 FBXO41Q8TF61 875 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.29■□□□□ 0.52
SHANK1-201ENST00000293441 DDX47Q9H0S4 455 aaKnown RBP18.29■□□□□ 0.52
SHANK1-201ENST00000293441 ZNF212Q9UDV6 495 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 CCDC137Q6PK04 289 aaKnown RBP18.29■□□□□ 0.52
SHANK1-201ENST00000293441 FAM151AQ8WW52 585 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 MTIF3Q9H2K0 278 aaKnown RBP18.29■□□□□ 0.52
SHANK1-201ENST00000293441 SMYD3Q9H7B4 428 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 COG4Q9H9E3 785 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 FBXO2Q9UK22 296 aaPredicted RBP18.29■□□□□ 0.52
SHANK1-201ENST00000293441 ASMTLO95671 621 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 ITGA4P13612 1032 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 SBK1Q52WX2 424 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 SNF8Q96H20 258 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 SYNDIG1Q9H7V2 258 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 ANGPTL2Q9UKU9 493 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 ZNF609O15014 1411 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 FAM205CA6NFA0 338 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 NR3C2P08235 984 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 EIF3EP60228 445 aaKnown RBP18.29■□□□□ 0.52
SHANK1-201ENST00000293441 PRKCEQ02156 737 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 FSCBQ5H9T9 825 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 STYK1Q6J9G0 422 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 GPRC5AQ8NFJ5 357 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 BFARQ9NZS9 450 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 NYAP2Q9P242 653 aa18.29■□□□□ 0.52
SHANK1-201ENST00000293441 HNRNPCL2B2RXH8 293 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 HNRNPCL1O60812 293 aaKnown RBP18.28■□□□□ 0.52
SHANK1-201ENST00000293441 RTN2O75298 545 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 SCP2P22307 547 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 GCKP35557 465 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 ESRRGP62508 458 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 ITPK1Q13572 414 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 UBE2Q2Q8WVN8 375 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 PHF20Q9BVI0 1012 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 TRPV6Q9H1D0 765 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 HDAC6Q9UBN7 1215 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 PFASO15067 1338 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 TMEM259Q4ZIN3 620 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 PDXKO00764 312 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 DCTN3O75935 186 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 PDHBP11177 359 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 CETPP11597 493 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 PDXDC1Q6P996 788 aa18.28■□□□□ 0.52
SHANK1-201ENST00000293441 LSM7Q9UK45 103 aaKnown RBP18.28■□□□□ 0.52
SHANK1-201ENST00000293441 USP31Q70CQ4 1352 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms