RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SP140Q13342 867 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 RAB39AQ14964 217 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 TBC1D10BQ4KMP7 808 aaPredicted RBP5.74□□□□□ -1.49
CCDC54-201ENST00000261058 OVCH2Q7RTZ1 564 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 DENND1CQ8IV53 801 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 GRAMD1CQ8IYS0 662 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 IL17RAQ96F46 866 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 PTPN18Q99952 460 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 TMEM60Q9H2L4 133 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 TDP1Q9NUW8 608 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 CALCOCO1Q9P1Z2 691 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 GABBR1Q9UBS5 961 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 DDX20Q9UHI6 824 aaKnown RBP5.74□□□□□ -1.49
CCDC54-201ENST00000261058 SLC30A1Q9Y6M5 507 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 CTNND1O60716 968 aaKnown RBP5.74□□□□□ -1.49
CCDC54-201ENST00000261058 CDC14BO60729 498 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 TUSC2O75896 110 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 HRGP04196 525 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 RPS19P39019 145 aaKnown RBP5.74□□□□□ -1.49
CCDC54-201ENST00000261058 MAP2K6P52564 334 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 HK3P52790 923 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 TLE1Q04724 770 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 GRM3Q14832 879 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 FAM47AQ5JRC9 791 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 MFSD14BQ5SR56 506 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 CCSAPQ6IQ19 270 aaPredicted RBP5.74□□□□□ -1.49
CCDC54-201ENST00000261058 NOL8Q76FK4 1167 aaKnown RBP5.74□□□□□ -1.49
CCDC54-201ENST00000261058 PDZD4Q76G19 769 aaPredicted RBP5.74□□□□□ -1.49
CCDC54-201ENST00000261058 DRC7Q8IY82 874 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 FAM43AQ8N2R8 423 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 ZBTB34Q8NCN2 500 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 REPS2Q8NFH8 660 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 CEP95Q96GE4 821 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 TEPSINQ96N21 525 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 LRFN3Q9BTN0 628 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 PLA2G12BQ9BX93 195 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 PARD6AQ9NPB6 346 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 RCAN3Q9UKA8 241 aa5.74□□□□□ -1.49
CCDC54-201ENST00000261058 AJAP1Q9UKB5 411 aaPredicted RBP5.74□□□□□ -1.49
CCDC54-201ENST00000261058 MYBBP1AQ9BQG0 1328 aaKnown RBP5.73□□□□□ -1.49
CCDC54-201ENST00000261058 ZMYM3Q14202 1370 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 A0A1W2PRX2 142 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 A6NNZ2 444 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 HOXA3O43365 443 aaPredicted RBP5.73□□□□□ -1.49
CCDC54-201ENST00000261058 B3GALT2O43825 422 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 GPR32O75388 356 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 IL2RBP14784 551 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 FPR1P21462 350 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 AGFG1P52594 562 aaKnown RBP5.73□□□□□ -1.49
CCDC54-201ENST00000261058 USP14P54578 494 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 NPEPPSP55786 919 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 PER3P56645 1201 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 THEMIS2Q5TEJ8 643 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 OTUD7BQ6GQQ9 843 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 TAX1BP1Q86VP1 789 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 KIAA0319LQ8IZA0 1049 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 OR5M3Q8NGP4 307 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 MDM1Q8TC05 714 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 RGMAQ96B86 450 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 LRRC37BQ96QE4 947 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 CDC5LQ99459 802 aaKnown RBP5.73□□□□□ -1.49
CCDC54-201ENST00000261058 TCF25Q9BQ70 676 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 DDX21Q9NR30 783 aaKnown RBP eCLIP5.73□□□□□ -1.49
CCDC54-201ENST00000261058 FAM30AQ9NZY2 134 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 POLHQ9Y253 713 aa5.73□□□□□ -1.49
CCDC54-201ENST00000261058 GPR42O15529 346 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 PRICKLE3O43900 615 aaPredicted RBP5.72□□□□□ -1.49
CCDC54-201ENST00000261058 UBXN7O94888 489 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 DDCP20711 480 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 CTXN1P60606 82 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 APBA1Q02410 837 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 NOGQ13253 232 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 ARHGAP29Q52LW3 1261 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 FAM111BQ6SJ93 734 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 DOK3Q7L591 496 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 GPRIN1Q7Z2K8 1008 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 DCBLD1Q8N8Z6 715 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 PPP1R35Q8TAP8 253 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 CCHCR1Q8TD31 782 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 CCDC136Q96JN2 1154 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 CLPTM1LQ96KA5 538 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 RBM15Q96T37 977 aaKnown RBP eCLIP5.72□□□□□ -1.49
CCDC54-201ENST00000261058 UHRF1Q96T88 793 aaPredicted RBP5.72□□□□□ -1.49
CCDC54-201ENST00000261058 CGRRF1Q99675 332 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 SENP6Q9GZR1 1112 aaPredicted RBP5.72□□□□□ -1.49
CCDC54-201ENST00000261058 C12orf65Q9H3J6 166 aaKnown RBP5.72□□□□□ -1.49
CCDC54-201ENST00000261058 LDAHQ9H6V9 325 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 KMT5AQ9NQR1 393 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 TMEM140Q9NV12 185 aa5.72□□□□□ -1.49
CCDC54-201ENST00000261058 NT5C1B-RDH14C9J2C7 533 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 FAM227AF5H4B4 570 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 PJA2O43164 708 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 RAD17O75943 681 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 STC2O76061 302 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 INHBBP09529 407 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 NKX6-1P78426 367 aaPredicted RBP5.71□□□□□ -1.5
CCDC54-201ENST00000261058 DACT2Q5SW24 774 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 TCTN3Q6NUS6 607 aa5.71□□□□□ -1.5
CCDC54-201ENST00000261058 SEM1Q6ZVN7 128 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms