RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 JMJD4Q9H9V9 463 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 HSPBP1Q9NZL4 362 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 APEX2Q9UBZ4 518 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 RGPD2P0DJD1 1756 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 CLGNO14967 610 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 KIAA0391O15091 583 aaKnown RBP12.22□□□□□ -0.45
NOD1-201ENST00000222823 SLC16A3O15427 465 aaKnown RBP12.22□□□□□ -0.45
NOD1-201ENST00000222823 CFLARO15519 480 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 VSNL1P62760 191 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 KLHL38Q2WGJ6 581 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 KCNV1Q6PIU1 500 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 TRIM65Q6PJ69 517 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 EPM2AIP1Q7L775 607 aaPredicted RBP12.22□□□□□ -0.45
NOD1-201ENST00000222823 FASTKD5Q7L8L6 764 aaKnown RBP12.22□□□□□ -0.45
NOD1-201ENST00000222823 C1orf54Q8WWF1 131 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 PPP1R9AQ9ULJ8 1098 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 SPEF2Q9C093 1822 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 GGPS1O95749 300 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 KLRK1P26718 216 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 GALCP54803 685 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 OCRLQ01968 901 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 HEATR6Q6AI08 1181 aaKnown RBP12.22□□□□□ -0.45
NOD1-201ENST00000222823 LRRC31Q6UY01 552 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 SYT2Q8N9I0 419 aaPredicted RBP12.22□□□□□ -0.45
NOD1-201ENST00000222823 KIF12Q96FN5 646 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 PPARGC1AQ9UBK2 798 aaKnown RBP12.22□□□□□ -0.45
NOD1-201ENST00000222823 KDM4FA0A1W2PPD8 638 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 CREB3O43889 395 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 HSPA4LO95757 839 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 FMO5P49326 533 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 HDLBPQ00341 1268 aaKnown RBP12.21□□□□□ -0.45
NOD1-201ENST00000222823 MLXIPLQ9NP71 852 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 PARVAQ9NVD7 372 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 BFARQ9NZS9 450 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 ZNF70Q9UC06 446 aaPredicted RBP12.21□□□□□ -0.45
NOD1-201ENST00000222823 PRKAG2Q9UGJ0 569 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 MAD2L2Q9UI95 211 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 RTN2O75298 545 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 DCTN3O75935 186 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 KRT14P02533 472 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 RPA1P27694 616 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 ACOT2P49753 483 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 PPP2R2AP63151 447 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 SEPT1Q8WYJ6 367 aa12.21□□□□□ -0.45
NOD1-201ENST00000222823 DHX35Q9H5Z1 703 aaKnown RBP12.21□□□□□ -0.45
NOD1-201ENST00000222823 PAMP19021 973 aa12.21□□□□□ -0.46
NOD1-201ENST00000222823 CDH6P55285 790 aa12.21□□□□□ -0.46
NOD1-201ENST00000222823 DHX34Q14147 1143 aaKnown RBP12.21□□□□□ -0.46
NOD1-201ENST00000222823 EARS2Q5JPH6 523 aaKnown RBP12.21□□□□□ -0.46
NOD1-201ENST00000222823 HP1BP3Q5SSJ5 553 aaPredicted RBP12.21□□□□□ -0.46
NOD1-201ENST00000222823 FGD4Q96M96 766 aa12.21□□□□□ -0.46
NOD1-201ENST00000222823 LRRC1Q9BTT6 524 aa12.21□□□□□ -0.46
NOD1-201ENST00000222823 VPS11Q9H270 941 aa12.21□□□□□ -0.46
NOD1-201ENST00000222823 C19orf81C9J6K1 198 aa12.21□□□□□ -0.46
NOD1-201ENST00000222823 RGL2O15211 777 aa12.21□□□□□ -0.46
NOD1-201ENST00000222823 CHEK2O96017 543 aa12.21□□□□□ -0.46
NOD1-201ENST00000222823 PRKCBP05771 671 aa12.21□□□□□ -0.46
NOD1-201ENST00000222823 SH3BGRP55822 239 aaPredicted RBP12.21□□□□□ -0.46
NOD1-201ENST00000222823 ZNF280CQ8ND82 737 aa12.21□□□□□ -0.46
NOD1-201ENST00000222823 TMEM143Q96AN5 459 aa12.21□□□□□ -0.46
NOD1-201ENST00000222823 CHMP6Q96FZ7 201 aa12.21□□□□□ -0.46
NOD1-201ENST00000222823 KCND2Q9NZV8 630 aa12.21□□□□□ -0.46
NOD1-201ENST00000222823 FBXL5Q9UKA1 691 aa12.21□□□□□ -0.46
NOD1-201ENST00000222823 GMNCA6NCL1 334 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 PPARGP37231 505 aaPredicted RBP12.2□□□□□ -0.46
NOD1-201ENST00000222823 PAPOLAP51003 745 aaKnown RBP12.2□□□□□ -0.46
NOD1-201ENST00000222823 PDIA2Q13087 525 aaKnown RBP12.2□□□□□ -0.46
NOD1-201ENST00000222823 PARD3BQ8TEW8 1205 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 FSD1LQ9BXM9 530 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 DDX56Q9NY93 547 aaKnown RBP12.2□□□□□ -0.46
NOD1-201ENST00000222823 TARSL2A2RTX5 802 aaKnown RBP12.2□□□□□ -0.46
NOD1-201ENST00000222823 VGLL3A8MV65 326 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 PI4K2BG5E9Z4 385 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 BMP6P22004 513 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 IL1RL1Q01638 556 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 SH3RF1Q7Z6J0 888 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 ZBED8Q8IZ13 594 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 RIT2Q99578 217 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 SLC8A2Q9UPR5 921 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.2□□□□□ -0.46
NOD1-201ENST00000222823 PSMD14O00487 310 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 GNGT2O14610 69 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 SLC9A1P19634 815 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 ADORA2BP29275 332 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 IZUMO3Q5VZ72 239 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 RSBN1LQ6PCB5 846 aaPredicted RBP12.2□□□□□ -0.46
NOD1-201ENST00000222823 C18orf8Q96DM3 657 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 SERPINI1Q99574 410 aa12.2□□□□□ -0.46
NOD1-201ENST00000222823 TAP1Q03518 808 aa12.19□□□□□ -0.46
NOD1-201ENST00000222823 SNRNP35Q16560 246 aaKnown RBP12.19□□□□□ -0.46
NOD1-201ENST00000222823 HSP90AA5PQ58FG0 334 aa12.19□□□□□ -0.46
NOD1-201ENST00000222823 EFHC2Q5JST6 749 aa12.19□□□□□ -0.46
NOD1-201ENST00000222823 ATP11CQ8NB49 1132 aa12.19□□□□□ -0.46
NOD1-201ENST00000222823 HNRNPLLQ8WVV9 542 aaKnown RBP12.19□□□□□ -0.46
NOD1-201ENST00000222823 EXT2Q93063 718 aa12.19□□□□□ -0.46
NOD1-201ENST00000222823 ACAP3Q96P50 834 aa12.19□□□□□ -0.46
NOD1-201ENST00000222823 FGFR1OP2Q9NVK5 253 aa12.19□□□□□ -0.46
NOD1-201ENST00000222823 KBTBD4Q9NVX7 518 aa12.19□□□□□ -0.46
NOD1-201ENST00000222823 UVRAGQ9P2Y5 699 aa12.19□□□□□ -0.46
NOD1-201ENST00000222823 PITPNM2Q9BZ72 1349 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms