RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W MRPL3P36516 390 aa2.05□□□□□ -2.08
UBP16YPL072W LDB7P38210 180 aa2.05□□□□□ -2.08
UBP16YPL072W SEN34P39707 275 aa2.05□□□□□ -2.08
UBP16YPL072W THO1P40040 218 aaKnown RBP2.05□□□□□ -2.08
UBP16YPL072W MSS2P40990 351 aa2.05□□□□□ -2.08
UBP16YPL072W OTU1P43558 301 aa2.05□□□□□ -2.08
UBP16YPL072W IBA57P47158 497 aa2.05□□□□□ -2.08
UBP16YPL072W TPN1P53099 579 aa2.05□□□□□ -2.08
UBP16YPL072W YNL040WP53960 456 aaPredicted RBP2.05□□□□□ -2.08
UBP16YPL072W EBS1Q03466 884 aaKnown RBP2.05□□□□□ -2.08
UBP16YPL072W GRX3Q03835 250 aa2.05□□□□□ -2.08
UBP16YPL072W YOL029CQ08187 201 aa2.05□□□□□ -2.08
UBP16YPL072W SNU23Q12368 194 aaPredicted RBP2.05□□□□□ -2.08
UBP16YPL072W PET494P07390 489 aaPredicted RBP2.04□□□□□ -2.08
UBP16YPL072W TIP20P33891 701 aa2.04□□□□□ -2.08
UBP16YPL072W MRX3P38172 270 aa2.04□□□□□ -2.08
UBP16YPL072W YER184CP39961 794 aa2.04□□□□□ -2.08
UBP16YPL072W RRT13P40042 185 aa2.04□□□□□ -2.08
UBP16YPL072W COX15P40086 486 aa2.04□□□□□ -2.08
UBP16YPL072W YIL012WP40551 113 aa2.04□□□□□ -2.08
UBP16YPL072W YFL064CP43540 174 aa2.04□□□□□ -2.08
UBP16YPL072W MIC19P43594 170 aa2.04□□□□□ -2.08
UBP16YPL072W NBP1P52919 319 aaPredicted RBP2.04□□□□□ -2.08
UBP16YPL072W USE1P53146 245 aa2.04□□□□□ -2.08
UBP16YPL072W MAL13P53338 473 aa2.04□□□□□ -2.08
UBP16YPL072W PEX10Q05568 337 aa2.04□□□□□ -2.08
UBP16YPL072W RRS1Q08746 203 aaKnown RBP2.04□□□□□ -2.08
UBP16YPL072W CSM4Q08955 156 aa2.04□□□□□ -2.08
UBP16YPL072W TRM10Q12400 293 aa2.04□□□□□ -2.08
UBP16YPL072W YPL119C-AQ3E751 87 aa2.04□□□□□ -2.08
UBP16YPL072W MATALPHA1P0CY06 175 aa2.03□□□□□ -2.08
UBP16YPL072W HMLALPHA1P0CY07 175 aa2.03□□□□□ -2.08
UBP16YPL072W RPL4AP10664 362 aaKnown RBP2.03□□□□□ -2.08
UBP16YPL072W NHP6BP11633 99 aaKnown RBP2.03□□□□□ -2.08
UBP16YPL072W MRPL25P23369 157 aa2.03□□□□□ -2.08
UBP16YPL072W VPH2P32341 215 aa2.03□□□□□ -2.08
UBP16YPL072W QRI5P32344 111 aa2.03□□□□□ -2.08
UBP16YPL072W FRM2P37261 193 aa2.03□□□□□ -2.08
UBP16YPL072W MAL32P38158 584 aa2.03□□□□□ -2.08
UBP16YPL072W YBR062CP38239 180 aa2.03□□□□□ -2.08
UBP16YPL072W FZO1P38297 855 aa2.03□□□□□ -2.08
UBP16YPL072W ATG12P38316 186 aa2.03□□□□□ -2.08
UBP16YPL072W RPL4BP49626 362 aaKnown RBP2.03□□□□□ -2.08
UBP16YPL072W YGL118CP53132 145 aa2.03□□□□□ -2.08
UBP16YPL072W LIF1P53150 421 aa2.03□□□□□ -2.08
UBP16YPL072W MAL12P53341 584 aa2.03□□□□□ -2.08
UBP16YPL072W YNL095CP53932 642 aa2.03□□□□□ -2.08
UBP16YPL072W BNA7Q04066 261 aa2.03□□□□□ -2.08
UBP16YPL072W SNF8Q12483 233 aa2.03□□□□□ -2.08
UBP16YPL072W SAC3P46674 1301 aa2.03□□□□□ -2.08
UBP16YPL072W COQ1P18900 473 aa2.02□□□□□ -2.09
UBP16YPL072W CAT2P32796 670 aaKnown RBP2.02□□□□□ -2.09
UBP16YPL072W HEK2P38199 381 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09 RIP-Chip
UBP16YPL072W MBA1P38300 278 aa2.02□□□□□ -2.09
UBP16YPL072W PHO89P38361 574 aa2.02□□□□□ -2.09
UBP16YPL072W CUE1P38428 203 aa2.02□□□□□ -2.09
UBP16YPL072W EDC2P40023 145 aaPredicted RBP2.02□□□□□ -2.09
UBP16YPL072W DSN1P40568 576 aa2.02□□□□□ -2.09
UBP16YPL072W HSH155P49955 971 aaKnown RBP2.02□□□□□ -2.09
UBP16YPL072W SLX9P53251 210 aaPredicted RBP2.02□□□□□ -2.09
UBP16YPL072W NOP13P53883 403 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
UBP16YPL072W MRS2Q01926 470 aa2.02□□□□□ -2.09
UBP16YPL072W YMR244WQ04018 355 aa2.02□□□□□ -2.09
UBP16YPL072W YPR098CQ06089 161 aa2.02□□□□□ -2.09
UBP16YPL072W ATG17Q06410 417 aa2.02□□□□□ -2.09
UBP16YPL072W YDR018CQ12185 396 aa2.02□□□□□ -2.09
UBP16YPL072W ADF1Q2V2Q1 113 aa2.02□□□□□ -2.09
UBP16YPL072W SSN2P38931 1420 aa2.02□□□□□ -2.09
UBP16YPL072W FLO11P08640 1367 aa2.02□□□□□ -2.09
UBP16YPL072W RHO1P06780 209 aaKnown RBP2.01□□□□□ -2.09
UBP16YPL072W RPS19AP07280 144 aaKnown RBP2.01□□□□□ -2.09
UBP16YPL072W RPS19BP07281 144 aaPredicted RBP2.01□□□□□ -2.09
UBP16YPL072W POX1P13711 748 aa2.01□□□□□ -2.09
UBP16YPL072W OSM1P21375 501 aaKnown RBP2.01□□□□□ -2.09
UBP16YPL072W VMA6P32366 345 aaKnown RBP2.01□□□□□ -2.09
UBP16YPL072W SGE1P33335 543 aa2.01□□□□□ -2.09
UBP16YPL072W ZRT3P34240 503 aa2.01□□□□□ -2.09
UBP16YPL072W SMP1P38128 452 aa2.01□□□□□ -2.09
UBP16YPL072W MED8P38304 223 aa2.01□□□□□ -2.09
UBP16YPL072W SIP3P38717 1229 aa2.01□□□□□ -2.09
UBP16YPL072W AVT7P40501 490 aa2.01□□□□□ -2.09
UBP16YPL072W YGR067CP53243 804 aa2.01□□□□□ -2.09
UBP16YPL072W RHO3Q00245 231 aaKnown RBP2.01□□□□□ -2.09
UBP16YPL072W CDC14Q00684 551 aa2.01□□□□□ -2.09
UBP16YPL072W YPL113CQ02961 396 aa2.01□□□□□ -2.09
UBP16YPL072W SPO77Q06134 477 aa2.01□□□□□ -2.09
UBP16YPL072W YPL150WQ12152 901 aa2.01□□□□□ -2.09
UBP16YPL072W YCT1Q12235 531 aa2.01□□□□□ -2.09
UBP16YPL072W GIS3Q12418 502 aa2.01□□□□□ -2.09
UBP16YPL072W YAL067W-AQ8TGK6 75 aa2.01□□□□□ -2.09
UBP16YPL072W RPP0P05317 312 aaKnown RBP2.01□□□□□ -2.09
UBP16YPL072W TCP1P12612 559 aaKnown RBP2.01□□□□□ -2.09
UBP16YPL072W STE18P18852 110 aa2.01□□□□□ -2.09
UBP16YPL072W HOM6P31116 359 aaKnown RBP2.01□□□□□ -2.09
UBP16YPL072W SSO1P32867 290 aa2.01□□□□□ -2.09
UBP16YPL072W JEN1P36035 616 aa2.01□□□□□ -2.09
UBP16YPL072W POP8P38208 133 aa2.01□□□□□ -2.09
UBP16YPL072W YHI9P38765 294 aa2.01□□□□□ -2.09
UBP16YPL072W ASP1P38986 381 aaPredicted RBP2.01□□□□□ -2.09
UBP16YPL072W SMB1P40018 196 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms