RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A MED4Q12343 284 aa2.39□□□□□ -2.03
YDR170W-AYDR170W-A FAB1P34756 2278 aa2.38□□□□□ -2.03
YDR170W-AYDR170W-A YMR316C-AI2HB70 103 aa2.38□□□□□ -2.03
YDR170W-AYDR170W-A RAD3P06839 778 aa2.38□□□□□ -2.03
YDR170W-AYDR170W-A CWP1P28319 239 aa2.38□□□□□ -2.03
YDR170W-AYDR170W-A KRE6P32486 720 aa2.38□□□□□ -2.03
YDR170W-AYDR170W-A PRY2P36110 329 aa2.38□□□□□ -2.03
YDR170W-AYDR170W-A PRS4P38063 326 aaPredicted RBP2.38□□□□□ -2.03
YDR170W-AYDR170W-A SER33P40510 469 aa2.38□□□□□ -2.03
YDR170W-AYDR170W-A SYS1P41544 203 aa2.38□□□□□ -2.03
YDR170W-AYDR170W-A PFS2P42841 465 aaKnown RBP2.38□□□□□ -2.03
YDR170W-AYDR170W-A YNL134CP53912 376 aaKnown RBP2.38□□□□□ -2.03
YDR170W-AYDR170W-A SWS2P53937 143 aa2.38□□□□□ -2.03
YDR170W-AYDR170W-A MRS2Q01926 470 aa2.38□□□□□ -2.03
YDR170W-AYDR170W-A SDO1Q07953 250 aaKnown RBP2.38□□□□□ -2.03
YDR170W-AYDR170W-A YPL264CQ08980 353 aa2.38□□□□□ -2.03
YDR170W-AYDR170W-A PRM7Q12459 698 aa2.38□□□□□ -2.03
YDR170W-AYDR170W-A CAM1P29547 415 aaKnown RBP2.37□□□□□ -2.03
YDR170W-AYDR170W-A CAT2P32796 670 aaKnown RBP2.37□□□□□ -2.03
YDR170W-AYDR170W-A YIR035CP40579 254 aa2.37□□□□□ -2.03
YDR170W-AYDR170W-A RPL10P41805 221 aaKnown RBP2.37□□□□□ -2.03
YDR170W-AYDR170W-A BNA6P43619 295 aa2.37□□□□□ -2.03
YDR170W-AYDR170W-A YJR012CP47087 207 aa2.37□□□□□ -2.03
YDR170W-AYDR170W-A NUP84P52891 726 aa2.37□□□□□ -2.03
YDR170W-AYDR170W-A NBP35P52920 328 aa2.37□□□□□ -2.03
YDR170W-AYDR170W-A SRL4Q03085 281 aa2.37□□□□□ -2.03
YDR170W-AYDR170W-A AI5_BETAQ9ZZX0 354 aa2.37□□□□□ -2.03
YDR170W-AYDR170W-A STH1P32597 1359 aa2.36□□□□□ -2.03
YDR170W-AYDR170W-A RPL4AP10664 362 aaKnown RBP2.36□□□□□ -2.03
YDR170W-AYDR170W-A ARO4P32449 370 aaKnown RBP2.36□□□□□ -2.03
YDR170W-AYDR170W-A SKI2P35207 1287 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
YDR170W-AYDR170W-A MRX3P38172 270 aa2.36□□□□□ -2.03
YDR170W-AYDR170W-A POP8P38208 133 aa2.36□□□□□ -2.03
YDR170W-AYDR170W-A YHI9P38765 294 aa2.36□□□□□ -2.03
YDR170W-AYDR170W-A YHR045WP38775 560 aa2.36□□□□□ -2.03
YDR170W-AYDR170W-A BIG1P38813 335 aa2.36□□□□□ -2.03
YDR170W-AYDR170W-A DSN1P40568 576 aa2.36□□□□□ -2.03
YDR170W-AYDR170W-A RPL4BP49626 362 aaKnown RBP2.36□□□□□ -2.03
YDR170W-AYDR170W-A MAL13P53338 473 aa2.36□□□□□ -2.03
YDR170W-AYDR170W-A ZRG17P53735 605 aa2.36□□□□□ -2.03
YDR170W-AYDR170W-A OSH6Q02201 448 aa2.36□□□□□ -2.03
YDR170W-AYDR170W-A NNT1Q05874 261 aa2.36□□□□□ -2.03
YDR170W-AYDR170W-A YPR195CQ06594 109 aa2.36□□□□□ -2.03
YDR170W-AYDR170W-A SGT2Q12118 346 aaKnown RBP2.36□□□□□ -2.03
YDR170W-AYDR170W-A CDC42P19073 191 aa2.35□□□□□ -2.03
YDR170W-AYDR170W-A PRE7P23724 241 aaKnown RBP2.35□□□□□ -2.03
YDR170W-AYDR170W-A ERG2P32352 222 aa2.35□□□□□ -2.03
YDR170W-AYDR170W-A AST1P35183 429 aa2.35□□□□□ -2.03
YDR170W-AYDR170W-A MED8P38304 223 aa2.35□□□□□ -2.03
YDR170W-AYDR170W-A PHO89P38361 574 aa2.35□□□□□ -2.03
YDR170W-AYDR170W-A FMC1P40491 155 aa2.35□□□□□ -2.03
YDR170W-AYDR170W-A COS4P43542 379 aa2.35□□□□□ -2.03
YDR170W-AYDR170W-A LIA1P47120 325 aaKnown RBP2.35□□□□□ -2.03
YDR170W-AYDR170W-A SWT21P53873 357 aaPredicted RBP2.35□□□□□ -2.03
YDR170W-AYDR170W-A FMP41P53889 259 aaKnown RBP2.35□□□□□ -2.03
YDR170W-AYDR170W-A YNL095CP53932 642 aa2.35□□□□□ -2.03
YDR170W-AYDR170W-A BOP2Q06150 570 aa2.35□□□□□ -2.03
YDR170W-AYDR170W-A YOR029WQ12243 111 aa2.35□□□□□ -2.03
YDR170W-AYDR170W-A ATG31Q12421 196 aa2.35□□□□□ -2.03
YDR170W-AYDR170W-A SNF8Q12483 233 aa2.35□□□□□ -2.03
YDR170W-AYDR170W-A VPS3P23643 1011 aa2.34□□□□□ -2.04
YDR170W-AYDR170W-A HMT1P38074 348 aa2.34□□□□□ -2.04
YDR170W-AYDR170W-A YFR045WP43617 309 aa2.34□□□□□ -2.04
YDR170W-AYDR170W-A NBP1P52919 319 aaPredicted RBP2.34□□□□□ -2.04
YDR170W-AYDR170W-A EBS1Q03466 884 aaKnown RBP2.34□□□□□ -2.04
YDR170W-AYDR170W-A TVP15Q03860 143 aa2.34□□□□□ -2.04
YDR170W-AYDR170W-A CSM4Q08955 156 aa2.34□□□□□ -2.04
YDR170W-AYDR170W-A IES3Q12345 250 aa2.34□□□□□ -2.04
YDR170W-AYDR170W-A ATG5Q12380 294 aa2.34□□□□□ -2.04
YDR170W-AYDR170W-A YOL163WP0CF20 169 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A YAK1P14680 807 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A RNA15P25299 296 aaPredicted RBP2.33□□□□□ -2.04
YDR170W-AYDR170W-A QRI5P32344 111 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A AGA2P32781 87 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A YIL059CP40520 121 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A AGX1P43567 385 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A RPE1P46969 238 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A RSM27P53305 110 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A PET117Q02771 107 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A YDR209CQ03480 137 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A YDR222WQ04925 415 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A DXO1Q06349 442 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A PAM18Q07914 168 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A TY3A-GQ12173 290 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A MSH5Q12175 901 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A TY3A-IQ99219 290 aa2.33□□□□□ -2.04
YDR170W-AYDR170W-A YBL081WP38180 368 aaKnown RBP2.32□□□□□ -2.04
YDR170W-AYDR170W-A HEK2P38199 381 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
YDR170W-AYDR170W-A TRM7P38238 310 aaKnown RBP2.32□□□□□ -2.04
YDR170W-AYDR170W-A YHL049CP38722 271 aa2.32□□□□□ -2.04
YDR170W-AYDR170W-A SMB1P40018 196 aaKnown RBP2.32□□□□□ -2.04
YDR170W-AYDR170W-A GLG2P47011 380 aa2.32□□□□□ -2.04
YDR170W-AYDR170W-A CPR7P47103 393 aa2.32□□□□□ -2.04
YDR170W-AYDR170W-A HSH155P49955 971 aaKnown RBP2.32□□□□□ -2.04
YDR170W-AYDR170W-A SLX9P53251 210 aaPredicted RBP2.32□□□□□ -2.04
YDR170W-AYDR170W-A MRPL50P53724 139 aa2.32□□□□□ -2.04
YDR170W-AYDR170W-A KRE28Q04431 385 aa2.32□□□□□ -2.04
YDR170W-AYDR170W-A PRR2Q12310 699 aa2.32□□□□□ -2.04
YDR170W-AYDR170W-A YPL119C-AQ3E751 87 aa2.32□□□□□ -2.04
YDR170W-AYDR170W-A COS2P0CX12 379 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 68.3 ms