RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 CHMLP26374 656 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 LIFRP42702 1097 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 MAGEA9P43362 315 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 SCNN1GP51170 649 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 ADCY1Q08828 1119 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 PRR16Q569H4 304 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 MICU3Q86XE3 530 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 CELF5Q8N6W0 485 aaKnown RBP10.89□□□□□ -0.67
PHGDH-212ENST00000641247 ZNF579Q8NAF0 562 aaKnown RBP10.89□□□□□ -0.67
PHGDH-212ENST00000641247 ZFP42Q96MM3 310 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 NLRP4Q96MN2 994 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 NELL2Q99435 816 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 CLSTN3Q9BQT9 956 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 PHF20Q9BVI0 1012 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 EIF2AQ9BY44 585 aaKnown RBP10.89□□□□□ -0.67
PHGDH-212ENST00000641247 UNC45AQ9H3U1 944 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 FNIP2Q9P278 1114 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 KANSL3Q9P2N6 904 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 DNMT3BQ9UBC3 853 aaKnown RBP10.89□□□□□ -0.67
PHGDH-212ENST00000641247 DPP7Q9UHL4 492 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 ZMIZ1Q9ULJ6 1067 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 NDRG2Q9UN36 371 aaKnown RBP10.89□□□□□ -0.67
PHGDH-212ENST00000641247 HES2Q9Y543 173 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 SLC12A7Q9Y666 1083 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 PATJQ8NI35 1801 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 ARL5CA6NH57 179 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 WDR64B1ANS9 1081 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 MAFO75444 373 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-212ENST00000641247 C1RP00736 705 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 IGFBP6P24592 240 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-212ENST00000641247 MLH1P40692 756 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 SATB1Q01826 763 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 TANGO2Q6ICL3 276 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 PPP1R18Q6NYC8 613 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 FUT10Q6P4F1 479 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 MAMSTRQ6ZN01 415 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 ZNF410Q86VK4 478 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 NPAS3Q8IXF0 933 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 ING5Q8WYH8 240 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 MCRS1Q96EZ8 462 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 PAAF1Q9BRP4 392 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 FAM126AQ9BYI3 521 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-212ENST00000641247 CHRDQ9H2X0 955 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 C2orf42Q9NWW7 574 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 BARHL2Q9NY43 387 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 SEPT9Q9UHD8 586 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-212ENST00000641247 FBXW11Q9UKB1 542 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 BRPF3Q9ULD4 1205 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 IPPQ9Y573 584 aa10.88□□□□□ -0.67
PHGDH-212ENST00000641247 RBM8AQ9Y5S9 174 aaKnown RBP10.88□□□□□ -0.67
PHGDH-212ENST00000641247 CHURC1-FNTBB4DL54 471 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 SGSM2O43147 1006 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 C8AP07357 584 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 CALM1P0DP23 149 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 CALM2P0DP24 149 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 CALM3P0DP25 149 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 CIITAP33076 1130 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 MCM5P33992 734 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 FNTBP49356 437 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 CDC42EP1Q00587 391 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 PFKPQ01813 784 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 SIM2Q14190 667 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-212ENST00000641247 SF3A2Q15428 464 aaKnown RBP10.87□□□□□ -0.67
PHGDH-212ENST00000641247 CCDC6Q16204 474 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 SLC5A9Q2M3M2 681 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 WDR44Q5JSH3 913 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 ZNF852Q6ZMS4 543 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 ANO5Q75V66 913 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 MTSS1LQ765P7 747 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 SGMS1Q86VZ5 419 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 TMTC2Q8N394 836 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 LNX1Q8TBB1 728 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-212ENST00000641247 TMEM87BQ96K49 555 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 MTA3Q9BTC8 594 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 TMEM121BQ9BXQ6 578 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-212ENST00000641247 INO80BQ9C086 356 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-212ENST00000641247 LMAN1LQ9HAT1 526 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 POLIQ9UNA4 740 aa10.87□□□□□ -0.67
PHGDH-212ENST00000641247 CNTNAP2Q9UHC6 1331 aa10.86□□□□□ -0.67
PHGDH-212ENST00000641247 NCAM2O15394 837 aa10.86□□□□□ -0.67
PHGDH-212ENST00000641247 RRP9O43818 475 aaKnown RBP10.86□□□□□ -0.67
PHGDH-212ENST00000641247 LRP3O75074 770 aa10.86□□□□□ -0.67
PHGDH-212ENST00000641247 TOP3BO95985 862 aaKnown RBP10.86□□□□□ -0.67
PHGDH-212ENST00000641247 SRGAP2CP0DJJ0 459 aa10.86□□□□□ -0.67
PHGDH-212ENST00000641247 ITGA4P13612 1032 aa10.86□□□□□ -0.67
PHGDH-212ENST00000641247 SPINK2P20155 84 aa10.86□□□□□ -0.67
PHGDH-212ENST00000641247 FCARP24071 287 aa10.86□□□□□ -0.67
PHGDH-212ENST00000641247 CDC27P30260 824 aa10.86□□□□□ -0.67
PHGDH-212ENST00000641247 SETQ01105 290 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-212ENST00000641247 USP41Q3LFD5 358 aa10.86□□□□□ -0.67
PHGDH-212ENST00000641247 PLA2G4FQ68DD2 849 aa10.86□□□□□ -0.67
PHGDH-212ENST00000641247 ELMSAN1Q6PJG2 1045 aa10.86□□□□□ -0.67
PHGDH-212ENST00000641247 B3GNT9Q6UX72 402 aa10.86□□□□□ -0.67
PHGDH-212ENST00000641247 SLC5A5Q92911 643 aa10.86□□□□□ -0.67
PHGDH-212ENST00000641247 CXCL16Q9H2A7 254 aa10.86□□□□□ -0.67
PHGDH-212ENST00000641247 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.86□□□□□ -0.67
PHGDH-212ENST00000641247 RAB23Q9ULC3 237 aa10.86□□□□□ -0.67
PHGDH-212ENST00000641247 DDX11L8A8MPP1 907 aa10.85□□□□□ -0.67
PHGDH-212ENST00000641247 K7ESF4 209 aa10.85□□□□□ -0.67
PHGDH-212ENST00000641247 ECI2O75521 394 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms