RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 SCNN1GP51170 649 aa21.06■□□□□ 0.96
CCDC28A-203ENST00000617445 GRIK3Q13003 919 aa21.06■□□□□ 0.96
CCDC28A-203ENST00000617445 PRPF4BQ13523 1007 aaKnown RBP21.06■□□□□ 0.96
CCDC28A-203ENST00000617445 ECM1Q16610 540 aa21.06■□□□□ 0.96
CCDC28A-203ENST00000617445 AUTS2Q8WXX7 1259 aa21.06■□□□□ 0.96
CCDC28A-203ENST00000617445 ZFP42Q96MM3 310 aa21.06■□□□□ 0.96
CCDC28A-203ENST00000617445 HERC2P3Q9BVR0 1158 aa21.06■□□□□ 0.96
CCDC28A-203ENST00000617445 DDX19AQ9NUU7 478 aaKnown RBP21.06■□□□□ 0.96
CCDC28A-203ENST00000617445 MIOSQ9NXC5 875 aa21.06■□□□□ 0.96
CCDC28A-203ENST00000617445 PRKCBP05771 671 aa21.05■□□□□ 0.96
CCDC28A-203ENST00000617445 URODP06132 367 aa21.05■□□□□ 0.96
CCDC28A-203ENST00000617445 TMEM132AQ24JP5 1023 aa21.05■□□□□ 0.96
CCDC28A-203ENST00000617445 APBB1IPQ7Z5R6 666 aaPredicted RBP21.05■□□□□ 0.96
CCDC28A-203ENST00000617445 GPR65Q8IYL9 337 aa21.05■□□□□ 0.96
CCDC28A-203ENST00000617445 GSTCDQ8NEC7 633 aa21.05■□□□□ 0.96
CCDC28A-203ENST00000617445 BSNDQ8WZ55 320 aa21.05■□□□□ 0.96
CCDC28A-203ENST00000617445 KLHL5Q96PQ7 755 aa21.05■□□□□ 0.96
CCDC28A-203ENST00000617445 RPS6KC1Q96S38 1066 aa21.05■□□□□ 0.96
CCDC28A-203ENST00000617445 CCDC113Q9H0I3 377 aa21.05■□□□□ 0.96
CCDC28A-203ENST00000617445 PARP2Q9UGN5 583 aa21.05■□□□□ 0.96
CCDC28A-203ENST00000617445 DPP7Q9UHL4 492 aa21.05■□□□□ 0.96
CCDC28A-203ENST00000617445 RAPGEFL1Q9UHV5 662 aa21.05■□□□□ 0.96
CCDC28A-203ENST00000617445 PRG3Q9Y2Y8 225 aaPredicted RBP21.05■□□□□ 0.96
CCDC28A-203ENST00000617445 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.05■□□□□ 0.96
CCDC28A-203ENST00000617445 PHLPP2Q6ZVD8 1323 aa21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 EFEMP2O95967 443 aa21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 C1RP00736 705 aa21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 AKAP5P24588 427 aa21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 KLRC2P26717 231 aa21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 GJB2P29033 226 aa21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 ATAT1Q5SQI0 421 aa21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 CABP7Q86V35 215 aa21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 CDR2LQ86X02 465 aaPredicted RBP21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 RNF168Q8IYW5 571 aaPredicted RBP21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 TBC1D32Q96NH3 1257 aa21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 APOL5Q9BWW9 433 aa21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 PDZD7Q9H5P4 517 aa21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 MARCH5Q9NX47 278 aa21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 KCNG1Q9UIX4 513 aa21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 TECTAO75443 2155 aa21.04■□□□□ 0.96
CCDC28A-203ENST00000617445 TRIOO75962 3097 aa21.03■□□□□ 0.96
CCDC28A-203ENST00000617445 CNPP09543 421 aaKnown RBP21.03■□□□□ 0.96
CCDC28A-203ENST00000617445 EPCAMP16422 314 aa21.03■□□□□ 0.96
CCDC28A-203ENST00000617445 CLCN4P51793 760 aa21.03■□□□□ 0.96
CCDC28A-203ENST00000617445 ATP2C1P98194 919 aaPredicted RBP21.03■□□□□ 0.96
CCDC28A-203ENST00000617445 DCAF4L1Q3SXM0 396 aa21.03■□□□□ 0.96
CCDC28A-203ENST00000617445 ARL6IP4Q66PJ3 421 aaKnown RBP21.03■□□□□ 0.96
CCDC28A-203ENST00000617445 ELMSAN1Q6PJG2 1045 aa21.03■□□□□ 0.96
CCDC28A-203ENST00000617445 TIPINQ9BVW5 301 aa21.03■□□□□ 0.96
CCDC28A-203ENST00000617445 C17orf75Q9HAS0 396 aa21.03■□□□□ 0.96
CCDC28A-203ENST00000617445 SMC3Q9UQE7 1217 aa21.03■□□□□ 0.96
CCDC28A-203ENST00000617445 K7ERI5 159 aa21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 SSBP05455 408 aaKnown RBP eCLIP21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 ADH1AP07327 375 aa21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 GLUD2P49448 558 aa21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 ZXDAP98168 799 aa21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 IL17AQ16552 155 aa21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 RARS2Q5T160 578 aaKnown RBP21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 KIAA0319Q5VV43 1072 aa21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 KIAA1841Q6NSI8 718 aa21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 FAM122AQ96E09 287 aa21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 DRC1Q96MC2 740 aa21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 MFSD14AQ96MC6 490 aa21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 FBXL18Q96ME1 805 aa21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 SFXN1Q9H9B4 322 aa21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 RXFP1Q9HBX9 757 aa21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 RBM19Q9Y4C8 960 aaKnown RBP21.02■□□□□ 0.96
CCDC28A-203ENST00000617445 MUC6Q6W4X9 2439 aa21.02■□□□□ 0.95
CCDC28A-203ENST00000617445 MYO10Q9HD67 2058 aa21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 CD2BP2O95400 341 aaKnown RBP21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 PLA2G5P39877 138 aa21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 DSG1Q02413 1049 aa21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 CREMQ03060 361 aa21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 TUSC3Q13454 348 aa21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 HYIQ5T013 277 aa21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 BMP8AQ7Z5Y6 402 aa21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 NT5C3AQ9H0P0 336 aa21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 KCNH6Q9H252 994 aa21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 TMEM134Q9H6X4 195 aa21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 CHST7Q9NS84 486 aa21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 KLK14Q9P0G3 267 aa21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 ADAM28Q9UKQ2 775 aa21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 USTQ9Y2C2 406 aa21.01■□□□□ 0.95
CCDC28A-203ENST00000617445 E9PMD0 336 aa21■□□□□ 0.95
CCDC28A-203ENST00000617445 SLC26A4O43511 780 aa21■□□□□ 0.95
CCDC28A-203ENST00000617445 THP07101 528 aa21■□□□□ 0.95
CCDC28A-203ENST00000617445 DMP1Q13316 513 aaPredicted RBP21■□□□□ 0.95
CCDC28A-203ENST00000617445 USP41Q3LFD5 358 aa21■□□□□ 0.95
CCDC28A-203ENST00000617445 LARP1BQ659C4 914 aaKnown RBP21■□□□□ 0.95
CCDC28A-203ENST00000617445 CYP26C1Q6V0L0 522 aa21■□□□□ 0.95
CCDC28A-203ENST00000617445 TRIM67Q6ZTA4 783 aa21■□□□□ 0.95
CCDC28A-203ENST00000617445 MMTAG2Q9BU76 263 aaKnown RBP21■□□□□ 0.95
CCDC28A-203ENST00000617445 POMKQ9H5K3 350 aa21■□□□□ 0.95
CCDC28A-203ENST00000617445 SNTG2Q9NY99 539 aa21■□□□□ 0.95
CCDC28A-203ENST00000617445 SPDYE4A6NLX3 237 aa20.99■□□□□ 0.95
CCDC28A-203ENST00000617445 TTLL13PA6NNM8 815 aa20.99■□□□□ 0.95
CCDC28A-203ENST00000617445 PP2D1A8MPX8 630 aa20.99■□□□□ 0.95
CCDC28A-203ENST00000617445 C2CD2LO14523 706 aa20.99■□□□□ 0.95
CCDC28A-203ENST00000617445 TADA2AO75478 443 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms