RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 PASD1Q8IV76 773 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 SCFD1Q8WVM8 642 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 TRIM54Q9BYV2 358 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 SNX24Q9Y343 169 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 PITPNM2Q9BZ72 1349 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 TRIM49BA6NDI0 452 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 HMGB3O15347 200 aaKnown RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 IL18RAPO95256 599 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ANP32DO95626 131 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 FTLP02792 175 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 TBC1D10BQ4KMP7 808 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 AGBL2Q5U5Z8 902 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 POTEAQ6S8J7 498 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 PI16Q6UXB8 463 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 C7orf25Q9BPX7 421 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 STK33Q9BYT3 514 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 UVRAGQ9P2Y5 699 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 LIMA1Q9UHB6 759 aaKnown RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 A0A1W2PQJ5 194 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 POTEB3A0JP26 581 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 POTECB2RU33 542 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 TNPO2O14787 897 aaKnown RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 EYA4O95677 639 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 DUOXA2Q1HG44 320 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 SNRNP48Q6IEG0 339 aaKnown RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 POTEBQ6S5H4 581 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 C16orf89Q6UX73 402 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 C4orf22Q6V702 233 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 GTF3C2Q8WUA4 911 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 NAF1Q96HR8 494 aaKnown RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 EPAS1Q99814 870 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 FAM213AQ9BRX8 229 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 MAGED2Q9UNF1 606 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 ADGRG1Q9Y653 693 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 PRR29P0C7W0 189 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 RALAP11233 206 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 SERPINB9P50453 376 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 TKFCQ3LXA3 575 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 RIBC1Q8N443 379 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 ASAP3Q8TDY4 903 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 CEP95Q96GE4 821 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 DYDC2Q96IM9 177 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ZNF512BQ96KM6 892 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 AIFM3Q96NN9 605 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ACAD9Q9H845 621 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 JPH1Q9HDC5 661 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 DCP1AQ9NPI6 582 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 WDR35Q9P2L0 1181 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 HEY1Q9Y5J3 304 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 SLC16A4O15374 487 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 SRGAP2O75044 1071 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 H2AFYO75367 372 aaKnown RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 RPS6KA4O75676 772 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 RAD17O75943 681 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ESRRBO95718 433 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 KRT17Q04695 432 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 PDIA2Q13087 525 aaKnown RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 TXNRD1Q16881 649 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 SLC10A5Q5PT55 438 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ICE2Q659A1 982 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 MTHFD1LQ6UB35 978 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ULK4Q96C45 1275 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 MAP3K20Q9NYL2 800 aaKnown RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 BFARQ9NZS9 450 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 USP31Q70CQ4 1352 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 A0A1B0GTH6 734 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 POTEFA5A3E0 1075 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 POTEIP0CG38 1075 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 CDC25AP30304 524 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 MXD4Q14582 209 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 IZUMO3Q5VZ72 239 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 POTEGQ6S5H5 508 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 POTEEQ6S8J3 1075 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ZBED8Q8IZ13 594 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 STX19Q8N4C7 294 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ATL2Q8NHH9 583 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 SLC10A4Q96EP9 437 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 CYTH2Q99418 400 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 RBAKQ9NYW8 714 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 MINPP1Q9UNW1 487 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ARL2BPQ9Y2Y0 163 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 FARP1Q9Y4F1 1045 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 SLIT1O75093 1534 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 STXBP3O00186 592 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 PIGHQ14442 188 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 DNAL1Q4LDG9 190 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 DAB2IPQ5VWQ8 1189 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 CDC26Q8NHZ8 85 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 COG1Q8WTW3 980 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 AGPAT1Q99943 283 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 RASSF10A6NK89 507 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 MYO1CO00159 1063 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 CDH2P19022 906 aaPredicted RBP4.83□□□□□ -1.64
CHD9-221ENST00000615216 CYP2C19P33261 490 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ARPP19P56211 112 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 BCAR1P56945 870 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 CDK17Q00537 523 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 TBC1D19Q8N5T2 526 aa4.83□□□□□ -1.64
CHD9-221ENST00000615216 ZNF555Q8NEP9 628 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms