RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-223ENST00000604624 ELMO2Q96JJ3 720 aa4.32□□□□□ -1.72
KCNMA1-223ENST00000604624 FMO2Q99518 471 aa4.32□□□□□ -1.72
KCNMA1-223ENST00000604624 DDX50Q9BQ39 737 aaKnown RBP4.32□□□□□ -1.72
KCNMA1-223ENST00000604624 RHOBTB2Q9BYZ6 727 aa4.32□□□□□ -1.72
KCNMA1-223ENST00000604624 C12orf4Q9NQ89 552 aa4.32□□□□□ -1.72
KCNMA1-223ENST00000604624 FKBP14Q9NWM8 211 aa4.32□□□□□ -1.72
KCNMA1-223ENST00000604624 LRCH1Q9Y2L9 728 aa4.32□□□□□ -1.72
KCNMA1-223ENST00000604624 SHPRHQ149N8 1683 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 IDH3BO43837 385 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 IL10P22301 178 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 TPP2P29144 1249 aaPredicted RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 ARHGDIBP52566 201 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 STX4Q12846 297 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 MESDQ14696 234 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 ARID5BQ14865 1188 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 GALNT4Q8N4A0 578 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 OTUD5Q96G74 571 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 CALR3Q96L12 384 aaKnown RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 ADPGKQ9BRR6 497 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 TRIM51Q9BSJ1 452 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 MLXIPLQ9NP71 852 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 NUP205Q92621 2012 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 TNS3Q68CZ2 1445 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 MYO1DO94832 1006 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 HNMTP50135 292 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 CLCN6P51797 869 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 BTKQ06187 659 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 ANKS3Q6ZW76 656 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 LRRC70Q7Z2Q7 622 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 TRMT44Q8IYL2 757 aaKnown RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 PBXIP1Q96AQ6 731 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 TMA16Q96EY4 203 aaKnown RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 CHAMP1Q96JM3 812 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 GPBP1L1Q9HC44 474 aaPredicted RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 TAB2Q9NYJ8 693 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 ZFP69BQ9UJL9 534 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 BLOC1S6Q9UL45 172 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 DISP2A7MBM2 1401 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 MAGEB6P1A0A0J9YX57 407 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 GOLGA8SH3BPF8 625 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 XPO1O14980 1071 aaKnown RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 CFBP00751 764 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 POLR2EP19388 210 aaKnown RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 CHRNA2Q15822 529 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 CREB3L3Q68CJ9 461 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 WDR36Q8NI36 951 aaKnown RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 DDI1Q8WTU0 396 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 NELFBQ8WX92 580 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 SLC12A5Q9H2X9 1139 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 MRPL40Q9NQ50 206 aaKnown RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 MYO1FO00160 1098 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 STRNO43815 780 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 ATP6V1B1P15313 513 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 ZMYND11Q15326 602 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 BBS9Q3SYG4 887 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 TAF1BQ53T94 588 aaPredicted RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 SRLQ86TD4 932 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 SUCLG2Q96I99 432 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 SERHL2Q9H4I8 314 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 VIPAS39Q9H9C1 493 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 SERHLQ9NQF3 203 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 SEPT3Q9UH03 358 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 CABIN1Q9Y6J0 2220 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 RTL9Q8NET4 1388 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 CCDC166P0CW27 439 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 MLNP12872 115 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 ARMC4Q5T2S8 1044 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 PLEKHA7Q6IQ23 1121 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 ARMCX5Q6P1M9 558 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 XXYLT1Q8NBI6 393 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 DEPTORQ8TB45 409 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 MAGOHBQ96A72 148 aaKnown RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 TMEM5Q9Y2B1 443 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 MAP3K2Q9Y2U5 619 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 PCDHA5Q9Y5H7 936 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 COL22A1Q8NFW1 1626 aaPredicted RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 PSDA5PKW4 1024 aaPredicted RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 KCNA2P16389 499 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 EPB42P16452 691 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 NFKBIAP25963 317 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 SESN2P58004 480 aaPredicted RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 ABATP80404 500 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 CSTF3Q12996 717 aaKnown RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 MEI1Q5TIA1 1274 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 RNF19BQ6ZMZ0 732 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 ARHGEF25Q86VW2 580 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 CCNYL1Q8N7R7 359 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 KBTBD3Q8NAB2 608 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 CALML6Q8TD86 181 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 PYROXD1Q8WU10 500 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 INTS4Q96HW7 963 aaKnown RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 VPS50Q96JG6 964 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 SLC13A1Q9BZW2 595 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 SCN1AP35498 2009 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 LRRIQ4A6NIV6 560 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 ULK1O75385 1050 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 BAIAP3O94812 1187 aa4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 TCP1P17987 556 aaKnown RBP4.31□□□□□ -1.72
KCNMA1-223ENST00000604624 CDC27P30260 824 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms