RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 PABPC5Q96DU9 382 aaKnown RBP15.86■□□□□ 0.13
TUBE1-204ENST00000603621 TCF25Q9BQ70 676 aa15.86■□□□□ 0.13
TUBE1-204ENST00000603621 REEP2Q9BRK0 252 aa15.86■□□□□ 0.13
TUBE1-204ENST00000603621 TLE6Q9H808 572 aa15.86■□□□□ 0.13
TUBE1-204ENST00000603621 C17orf75Q9HAS0 396 aa15.86■□□□□ 0.13
TUBE1-204ENST00000603621 SNTG2Q9NY99 539 aa15.86■□□□□ 0.13
TUBE1-204ENST00000603621 KCND2Q9NZV8 630 aa15.86■□□□□ 0.13
TUBE1-204ENST00000603621 LZTS1Q9Y250 596 aa15.86■□□□□ 0.13
TUBE1-204ENST00000603621 GIT1Q9Y2X7 761 aa15.86■□□□□ 0.13
TUBE1-204ENST00000603621 PHLPP2Q6ZVD8 1323 aa15.86■□□□□ 0.13
TUBE1-204ENST00000603621 SPTLC2O15270 562 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 LINC01565O15544 149 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 FAM13AO94988 1023 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 ALDH2P05091 517 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 PDIA4P13667 645 aaKnown RBP15.85■□□□□ 0.13
TUBE1-204ENST00000603621 DDIT3P35638 169 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 OR1G1P47890 313 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 SMTNP53814 917 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 RRAGBQ5VZM2 374 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 TAS1R3Q7RTX0 852 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 ZBTB33Q86T24 672 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 LINC00301Q8NCQ3 95 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 IGSF21Q96ID5 467 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 RPS6KC1Q96S38 1066 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 TMEM134Q9H6X4 195 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 ARHGAP28Q9P2N2 729 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 FAN1Q9Y2M0 1017 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 GDAQ9Y2T3 454 aa15.85■□□□□ 0.13
TUBE1-204ENST00000603621 PRG3Q9Y2Y8 225 aaPredicted RBP15.85■□□□□ 0.13
TUBE1-204ENST00000603621 RBM19Q9Y4C8 960 aaKnown RBP15.85■□□□□ 0.13
TUBE1-204ENST00000603621 NRP1O14786 923 aa15.84■□□□□ 0.13
TUBE1-204ENST00000603621 FSCN2O14926 492 aa15.84■□□□□ 0.13
TUBE1-204ENST00000603621 NCK2O43639 380 aa15.84■□□□□ 0.13
TUBE1-204ENST00000603621 BMP1P13497 986 aa15.84■□□□□ 0.13
TUBE1-204ENST00000603621 STRN3Q13033 797 aa15.84■□□□□ 0.13
TUBE1-204ENST00000603621 GIT2Q14161 759 aa15.84■□□□□ 0.13
TUBE1-204ENST00000603621 CLUL1Q15846 466 aa15.84■□□□□ 0.13
TUBE1-204ENST00000603621 DCAF4L1Q3SXM0 396 aa15.84■□□□□ 0.13
TUBE1-204ENST00000603621 VPS52Q8N1B4 723 aa15.84■□□□□ 0.13
TUBE1-204ENST00000603621 MYCT1Q8N699 235 aa15.84■□□□□ 0.13
TUBE1-204ENST00000603621 PDILTQ8N807 584 aa15.84■□□□□ 0.13
TUBE1-204ENST00000603621 ADAMTS19Q8TE59 1207 aa15.84■□□□□ 0.13
TUBE1-204ENST00000603621 BCL7CQ8WUZ0 217 aaPredicted RBP15.84■□□□□ 0.13
TUBE1-204ENST00000603621 ACO2Q99798 780 aaKnown RBP15.84■□□□□ 0.13
TUBE1-204ENST00000603621 TCHPQ9BT92 498 aa15.84■□□□□ 0.13
TUBE1-204ENST00000603621 TARS2Q9BW92 718 aaKnown RBP15.84■□□□□ 0.13
TUBE1-204ENST00000603621 MRPL4Q9BYD3 311 aaKnown RBP15.84■□□□□ 0.13
TUBE1-204ENST00000603621 LARSQ9P2J5 1176 aaKnown RBP15.84■□□□□ 0.13
TUBE1-204ENST00000603621 KCNG1Q9UIX4 513 aa15.84■□□□□ 0.13
TUBE1-204ENST00000603621 CITO14578 2027 aa15.84■□□□□ 0.13
TUBE1-204ENST00000603621 CUL9Q8IWT3 2517 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 HIDE1A8MVS5 230 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 TBCAO75347 108 aaKnown RBP15.83■□□□□ 0.12
TUBE1-204ENST00000603621 RECQL4O94761 1208 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 HARSP12081 509 aaKnown RBP15.83■□□□□ 0.12
TUBE1-204ENST00000603621 NDUFV1P49821 464 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 OSTNP61366 133 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 DLX2Q07687 328 aaPredicted RBP15.83■□□□□ 0.12
TUBE1-204ENST00000603621 ADAM15Q13444 863 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 ZNF568Q3ZCX4 644 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 PDE12Q6L8Q7 609 aaKnown RBP15.83■□□□□ 0.12
TUBE1-204ENST00000603621 DYMQ7RTS9 669 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 COLGALT2Q8IYK4 626 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 TMEM161BQ8NDZ6 487 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.83■□□□□ 0.12
TUBE1-204ENST00000603621 SPIRE2Q8WWL2 714 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 AUTS2Q8WXX7 1259 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 TMEM175Q9BSA9 504 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 NTPCRQ9BSD7 190 aaKnown RBP15.83■□□□□ 0.12
TUBE1-204ENST00000603621 NGRNQ9NPE2 291 aaKnown RBP15.83■□□□□ 0.12
TUBE1-204ENST00000603621 STK17AQ9UEE5 414 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 ODF2LQ9ULJ1 636 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 TNFSF13BQ9Y275 285 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 VCANP13611 3396 aa15.83■□□□□ 0.12
TUBE1-204ENST00000603621 TCHHQ07283 1943 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 CARNS1A5YM72 827 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 K7ENM7 598 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 INPPL1O15357 1258 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 YEATS4O95619 227 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 CXCL14O95715 111 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 MAPTP10636 758 aaKnown RBP15.82■□□□□ 0.12
TUBE1-204ENST00000603621 LTBRP36941 435 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 STAT6P42226 847 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 MATR3P43243 847 aaKnown RBP eCLIP15.82■□□□□ 0.12
TUBE1-204ENST00000603621 RBM10P98175 930 aaKnown RBP15.82■□□□□ 0.12
TUBE1-204ENST00000603621 SMC1AQ14683 1233 aaKnown RBP15.82■□□□□ 0.12
TUBE1-204ENST00000603621 BMS1Q14692 1282 aaKnown RBP15.82■□□□□ 0.12
TUBE1-204ENST00000603621 LEXMQ3ZCV2 418 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 PTCRAQ6ISU1 281 aaPredicted RBP15.82■□□□□ 0.12
TUBE1-204ENST00000603621 LLGL2Q6P1M3 1020 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 CCDC73Q6ZRK6 1079 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 SV2BQ7L1I2 683 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 APBB1IPQ7Z5R6 666 aaPredicted RBP15.82■□□□□ 0.12
TUBE1-204ENST00000603621 DDX53Q86TM3 631 aaKnown RBP15.82■□□□□ 0.12
TUBE1-204ENST00000603621 CEP120Q8N960 986 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 GSTCDQ8NEC7 633 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 RABGGTAQ92696 567 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 BICD1Q96G01 975 aa15.82■□□□□ 0.12
TUBE1-204ENST00000603621 ZBTB45Q96K62 511 aaPredicted RBP15.82■□□□□ 0.12
TUBE1-204ENST00000603621 NECAB3Q96P71 396 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms