RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 LAMC2Q13753 1193 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 TSR1Q2NL82 804 aaKnown RBP10.25□□□□□ -0.77
VPS25-205ENST00000590339 MTERF2Q49AM1 385 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 DCAF17Q5H9S7 520 aaPredicted RBP10.25□□□□□ -0.77
VPS25-205ENST00000590339 TMEM240Q5SV17 173 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 CELF3Q5SZQ8 465 aaKnown RBP10.25□□□□□ -0.77
VPS25-205ENST00000590339 FAM160B1Q5W0V3 765 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 HGSNATQ68CP4 663 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 SYT10Q6XYQ8 523 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 TAS1R3Q7RTX0 852 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 SYCP3Q8IZU3 236 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 ATRIPQ8WXE1 791 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 SEPT1Q8WYJ6 367 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 SCLYQ96I15 445 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 FAM167AQ96KS9 214 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 GPR20Q99678 358 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 MLXIPQ9HAP2 919 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 ZNHIT6Q9NWK9 470 aaKnown RBP10.25□□□□□ -0.77
VPS25-205ENST00000590339 MTMR10Q9NXD2 777 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 ARHGAP20Q9P2F6 1191 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 TBX20Q9UMR3 447 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 EXOC7Q9UPT5 735 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 DAAM1Q9Y4D1 1078 aa10.25□□□□□ -0.77
VPS25-205ENST00000590339 RANBP2P49792 3224 aaKnown RBP10.24□□□□□ -0.77
VPS25-205ENST00000590339 SSU72P8A0A1W2PR75 194 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 DENND3A2RUS2 1198 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 GRXCR1A8MXD5 290 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 H0YCG3 227 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 PMM2O15305 246 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 CTIFO43310 598 aaKnown RBP10.24□□□□□ -0.77
VPS25-205ENST00000590339 PIGRP01833 764 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 FGBP02675 491 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 PON1P27169 355 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 TCF7P36402 384 aaPredicted RBP10.24□□□□□ -0.77
VPS25-205ENST00000590339 ARL2P36404 184 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 FMO5P49326 533 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 SMTNP53814 917 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 ENPEPQ07075 957 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 DGKDQ16760 1214 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 EXOC3L4Q17RC7 722 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 ASTE1Q2TB18 679 aaPredicted RBP10.24□□□□□ -0.77
VPS25-205ENST00000590339 ZNF697Q5TEC3 545 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 KLHDC7AQ5VTJ3 777 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 GPR153Q6NV75 609 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 SLC39A4Q6P5W5 647 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 GBP6Q6ZN66 633 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 INTS8Q75QN2 995 aaKnown RBP10.24□□□□□ -0.77
VPS25-205ENST00000590339 OTOP2Q7RTS6 562 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 DEFB128Q7Z7B8 93 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 FBXL18Q96ME1 805 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 SPATA33Q96N06 139 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 CBWD1Q9BRT8 395 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 CRACR2AQ9BSW2 395 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 KIFC3Q9BVG8 833 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 SEZ6LQ9BYH1 1024 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 NHEJ1Q9H9Q4 299 aaPredicted RBP10.24□□□□□ -0.77
VPS25-205ENST00000590339 KMT5AQ9NQR1 393 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 HSPBP1Q9NZL4 362 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 FRMD4BQ9Y2L6 1034 aa10.24□□□□□ -0.77
VPS25-205ENST00000590339 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.23□□□□□ -0.77
VPS25-205ENST00000590339 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.23□□□□□ -0.77
VPS25-205ENST00000590339 ZBTB42B2RXF5 422 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 ANKRD63C9JTQ0 380 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 RBAK-RBAKDNI3L0D1 243 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 ZNF263O14978 683 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 P4HA2O15460 535 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 EXOC3O60645 756 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 N4BP1O75113 896 aaKnown RBP10.23□□□□□ -0.77
VPS25-205ENST00000590339 MAFO75444 373 aaPredicted RBP10.23□□□□□ -0.77
VPS25-205ENST00000590339 ADRB2P07550 413 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 PLEKP08567 350 aaPredicted RBP10.23□□□□□ -0.77
VPS25-205ENST00000590339 ZNF286BP0CG31 522 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 UCHL3P15374 230 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 SLC9A1P19634 815 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 GLRA2P23416 452 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 ADSSP30520 456 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 NAMPTP43490 491 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 STAT5BP51692 787 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 POLGP54098 1239 aaPredicted RBP10.23□□□□□ -0.77
VPS25-205ENST00000590339 JAM2P57087 298 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 POLR2FP61218 127 aaKnown RBP10.23□□□□□ -0.77
VPS25-205ENST00000590339 KRT83P78385 493 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 SMAD3P84022 425 aaKnown RBP10.23□□□□□ -0.77
VPS25-205ENST00000590339 MYL7Q01449 175 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 APBA1Q02410 837 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 PTGISQ16647 500 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 HSDL1Q3SXM5 330 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 C1orf220Q5T0J3 134 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 TCERG1LQ5VWI1 586 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 FAM109BQ6ICB4 259 aaPredicted RBP10.23□□□□□ -0.77
VPS25-205ENST00000590339 NFRKBQ6P4R8 1299 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 RRAGAQ7L523 313 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 PLPPR4Q7Z2D5 763 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 CACNA2D4Q7Z3S7 1137 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 C7orf31Q8N865 590 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 XXYLT1Q8NBI6 393 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 PLEKHO2Q8TD55 490 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 ASAP3Q8TDY4 903 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 ATP8B4Q8TF62 1192 aa10.23□□□□□ -0.77
VPS25-205ENST00000590339 BBXQ8WY36 941 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms