RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 DPF3Q92784 378 aa4.72□□□□□ -1.65
DDX42-211ENST00000580108 CEP95Q96GE4 821 aa4.72□□□□□ -1.65
DDX42-211ENST00000580108 GPATCH3Q96I76 525 aa4.72□□□□□ -1.65
DDX42-211ENST00000580108 TNFRSF12AQ9NP84 129 aa4.72□□□□□ -1.65
DDX42-211ENST00000580108 GINM1Q9NU53 330 aa4.72□□□□□ -1.65
DDX42-211ENST00000580108 UBP1Q9NZI7 540 aa4.72□□□□□ -1.65
DDX42-211ENST00000580108 ARPP21Q9UBL0 812 aaPredicted RBP4.72□□□□□ -1.65
DDX42-211ENST00000580108 CLIP2Q9UDT6 1046 aa4.72□□□□□ -1.65
DDX42-211ENST00000580108 SWAP70Q9UH65 585 aa4.72□□□□□ -1.65
DDX42-211ENST00000580108 ZMYND8Q9ULU4 1186 aaPredicted RBP4.72□□□□□ -1.65
DDX42-211ENST00000580108 TMX2Q9Y320 296 aa4.72□□□□□ -1.65
DDX42-211ENST00000580108 RABGAP1Q9Y3P9 1069 aa4.72□□□□□ -1.65
DDX42-211ENST00000580108 RIPK3Q9Y572 518 aa4.72□□□□□ -1.65
DDX42-211ENST00000580108 ROBO3Q96MS0 1386 aa4.72□□□□□ -1.65
DDX42-211ENST00000580108 PFASO15067 1338 aa4.72□□□□□ -1.65
DDX42-211ENST00000580108 ERC2O15083 957 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 WDR46O15213 610 aaKnown RBP4.71□□□□□ -1.66
DDX42-211ENST00000580108 IGSF3O75054 1194 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 GLRX3O76003 335 aaKnown RBP4.71□□□□□ -1.66
DDX42-211ENST00000580108 PRKCAP17252 672 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 ADORA2AP29274 412 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 CNGA1P29973 690 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 MAPK4P31152 587 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 RGS2P41220 211 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 USP14P54578 494 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 PPARAQ07869 468 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 RAD51AP2Q09MP3 1159 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 HDAC1Q13547 482 aaPredicted RBP4.71□□□□□ -1.66
DDX42-211ENST00000580108 GRB14Q14449 540 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 COG2Q14746 738 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 SKOR2Q2VWA4 1001 aaPredicted RBP4.71□□□□□ -1.66
DDX42-211ENST00000580108 SEZ6Q53EL9 994 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 RRP12Q5JTH9 1297 aaKnown RBP4.71□□□□□ -1.66
DDX42-211ENST00000580108 HABP4Q5JVS0 413 aaKnown RBP4.71□□□□□ -1.66
DDX42-211ENST00000580108 MAP3K21Q5TCX8 1036 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 CRTC3Q6UUV7 619 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 GK5Q6ZS86 529 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 FAM129CQ86XR2 697 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 TBC1D10CQ8IV04 446 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 SMC5Q8IY18 1101 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 CPXCR1Q8N123 301 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 TP53I13Q8NBR0 393 aaPredicted RBP4.71□□□□□ -1.66
DDX42-211ENST00000580108 SYT8Q8NBV8 401 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 TMEM52Q8NDY8 209 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 REPS2Q8NFH8 660 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 CXorf38Q8TB03 319 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 RILPL2Q969X0 211 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 CCDC17Q96LX7 622 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 SLC6A18Q96N87 628 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 APBA2Q99767 749 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 SPATC1LQ9H0A9 340 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 NAPBQ9H115 298 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 RAVER2Q9HCJ3 691 aaKnown RBP4.71□□□□□ -1.66
DDX42-211ENST00000580108 AP5S1Q9NUS5 200 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 STAP2Q9UGK3 403 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 ISY1Q9ULR0 285 aaKnown RBP4.71□□□□□ -1.66
DDX42-211ENST00000580108 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.71□□□□□ -1.66
DDX42-211ENST00000580108 TAF6LQ9Y6J9 622 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 MYH6P13533 1939 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 LTBP2Q14767 1821 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 MKI67P46013 3256 aaKnown RBP4.71□□□□□ -1.66
DDX42-211ENST00000580108 RPTORQ8N122 1335 aa4.71□□□□□ -1.66
DDX42-211ENST00000580108 BRCA2P51587 3418 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 SLC15A5A6NIM6 579 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 MEIS3P2A8K0S8 358 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 NUDT19A8MXV4 375 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 F5H6K3 240 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 TNFRSF10CO14798 259 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 SHOXO15266 292 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 ZFYP08048 801 aaPredicted RBP4.7□□□□□ -1.66
DDX42-211ENST00000580108 CYBAP13498 195 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 NME1P15531 152 aaKnown RBP4.7□□□□□ -1.66
DDX42-211ENST00000580108 BMP8BP34820 402 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 CCNFP41002 786 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 NCKAP1LP55160 1127 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 TFAP4Q01664 338 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 NUCB1Q02818 461 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 KLRC3Q07444 240 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 LRRC26Q2I0M4 334 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 RTP2Q5QGT7 225 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 GJC2Q5T442 439 aaPredicted RBP4.7□□□□□ -1.66
DDX42-211ENST00000580108 SNRNP48Q6IEG0 339 aaKnown RBP4.7□□□□□ -1.66
DDX42-211ENST00000580108 TMED8Q6PL24 325 aaPredicted RBP4.7□□□□□ -1.66
DDX42-211ENST00000580108 KCTD1Q719H9 257 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 DPP9Q86TI2 863 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 CHD1LQ86WJ1 897 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 AMOTL1Q8IY63 956 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 SOCS4Q8WXH5 440 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 GCC1Q96CN9 775 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 JMJD8Q96S16 334 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 SLC9A7Q96T83 725 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 CDADC1Q9BWV3 514 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 MKRN2Q9H000 416 aaKnown RBP4.7□□□□□ -1.66
DDX42-211ENST00000580108 CPVLQ9H3G5 476 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 KANSL2Q9H9L4 492 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 IL17RBQ9NRM6 502 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 TOMM22Q9NS69 142 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 HOMER2Q9NSB8 354 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 MTMR4Q9NYA4 1195 aa4.7□□□□□ -1.66
DDX42-211ENST00000580108 NYAP2Q9P242 653 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms