RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 MIA3Q5JRA6 1907 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 ARL5CA6NH57 179 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 SRRM3A6NNA2 597 aaPredicted RBP6.6□□□□□ -1.35
SMG6-219ENST00000575663 CHURC1-FNTBB4DL54 471 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 ZNF862O60290 1169 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 ERLIN2O94905 339 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 PAPSS2O95340 614 aaPredicted RBP6.6□□□□□ -1.35
SMG6-219ENST00000575663 ZNF806P0C7X5 589 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 RPL17P18621 184 aaKnown RBP6.6□□□□□ -1.35
SMG6-219ENST00000575663 NCLP19338 710 aaKnown RBP6.6□□□□□ -1.35
SMG6-219ENST00000575663 SFNP31947 248 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 FNTBP49356 437 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 RBM25P49756 843 aaKnown RBP6.6□□□□□ -1.35
SMG6-219ENST00000575663 SCNN1GP51170 649 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 NOVA1P51513 510 aaKnown RBP6.6□□□□□ -1.35
SMG6-219ENST00000575663 AFF1P51825 1210 aaKnown RBP6.6□□□□□ -1.35
SMG6-219ENST00000575663 JAK3P52333 1124 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 ANTXR2P58335 489 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 SATB1Q01826 763 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 RING1Q06587 406 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 DSC1Q08554 894 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 ZNF252P-AS1Q0IIN9 211 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 FZD5Q13467 585 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 DRP2Q13474 957 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 SF3A2Q15428 464 aaKnown RBP6.6□□□□□ -1.35
SMG6-219ENST00000575663 PDXDC1Q6P996 788 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 TMTC3Q6ZXV5 915 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 MRPL10Q7Z7H8 261 aaKnown RBP6.6□□□□□ -1.35
SMG6-219ENST00000575663 MB21D2Q8IYB1 491 aaPredicted RBP6.6□□□□□ -1.35
SMG6-219ENST00000575663 SPEM1Q8N4L4 309 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 SLC7A14Q8TBB6 771 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 IGDCC4Q8TDY8 1250 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 ING5Q8WYH8 240 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 MAP4K1Q92918 833 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 IRF7Q92985 503 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 ELSPBP1Q96BH3 223 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 MSANTD3Q96H12 275 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 LOXL4Q96JB6 756 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 TMEM87BQ96K49 555 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 B3GALT6Q96L58 329 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 YTHDC1Q96MU7 727 aaKnown RBP6.6□□□□□ -1.35
SMG6-219ENST00000575663 LSM14BQ9BX40 385 aaKnown RBP6.6□□□□□ -1.35
SMG6-219ENST00000575663 LMAN1LQ9HAT1 526 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 DISC1Q9NRI5 854 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 SUCLA2Q9P2R7 463 aaPredicted RBP6.6□□□□□ -1.35
SMG6-219ENST00000575663 MRPS23Q9Y3D9 190 aaKnown RBP6.6□□□□□ -1.35
SMG6-219ENST00000575663 SLC12A7Q9Y666 1083 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 PIAS3Q9Y6X2 628 aa6.6□□□□□ -1.35
SMG6-219ENST00000575663 CNTNAP5Q8WYK1 1306 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 SMCO2A6NFE2 343 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 SH2B2O14492 632 aaPredicted RBP6.59□□□□□ -1.35
SMG6-219ENST00000575663 TM4SF5O14894 197 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 HRO43593 1189 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 CHMP2AO43633 222 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 PRC1O43663 620 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 TADA2AO75478 443 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 EPN2O95208 641 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 EFEMP2O95967 443 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 CYP3A4P08684 503 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 CLK2P49760 499 aaKnown RBP6.59□□□□□ -1.35
SMG6-219ENST00000575663 NCBP1Q09161 790 aaKnown RBP6.59□□□□□ -1.35
SMG6-219ENST00000575663 SRSF5Q13243 272 aaKnown RBP6.59□□□□□ -1.35
SMG6-219ENST00000575663 GRM2Q14416 872 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 PSMD5Q16401 504 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 UVSSAQ2YD98 709 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 PRR16Q569H4 304 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 XKR3Q5GH77 459 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 DAB2IPQ5VWQ8 1189 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 RNF43Q68DV7 783 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 HEATR6Q6AI08 1181 aaKnown RBP6.59□□□□□ -1.35
SMG6-219ENST00000575663 NOTUMQ6P988 496 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 SYNE3Q6ZMZ3 975 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 RTL10Q7L3V2 364 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 SRGAP1Q7Z6B7 1085 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 WDR5BQ86VZ2 330 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 MICU3Q86XE3 530 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 RUFY2Q8WXA3 655 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 SLC7A3Q8WY07 619 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 PIK3R5Q8WYR1 880 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 CCDC51Q96ER9 411 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 PKNOX2Q96KN3 472 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 GAD1Q99259 594 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 TRMT61BQ9BVS5 477 aaKnown RBP6.59□□□□□ -1.35
SMG6-219ENST00000575663 TEKT3Q9BXF9 490 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 GPR62Q9BZJ7 368 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 TRIM6Q9C030 488 aaPredicted RBP6.59□□□□□ -1.35
SMG6-219ENST00000575663 ARRDC1-AS1Q9H2J1 176 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 OSBPL3Q9H4L5 887 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 ZFP14Q9HCL3 533 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 TRPV5Q9NQA5 729 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 RBM28Q9NW13 759 aaKnown RBP6.59□□□□□ -1.35
SMG6-219ENST00000575663 IPPQ9Y573 584 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 PCDHGA5Q9Y5G8 931 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 COL4A3BPQ9Y5P4 624 aa6.59□□□□□ -1.35
SMG6-219ENST00000575663 WDFY3Q8IZQ1 3526 aa6.59□□□□□ -1.36
SMG6-219ENST00000575663 CACNA1IQ9P0X4 2223 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 IGKV6-21A0A0C4DH24 114 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 F8W810 466 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 K7ESF4 209 aa6.58□□□□□ -1.36
SMG6-219ENST00000575663 TAF4O00268 1085 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms