RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 SUSD4Q5VX71 490 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 BTBD8Q5XKL5 378 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 ZNF585AQ6P3V2 769 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 ARHGAP36Q6ZRI8 547 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 Q6ZUG5 572 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 PPP1R42Q7Z4L9 355 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 SPRED1Q7Z699 444 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 OSTM1Q86WC4 334 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 CCDC146Q8IYE0 955 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 ZNF34Q8IZ26 560 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 FAM9BQ8IZU0 186 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 ZBTB38Q8NAP3 1195 aaPredicted RBP6.09□□□□□ -1.43
KARSP3-201ENST00000571212 PCDH19Q8TAB3 1148 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 DVL3Q92997 716 aaPredicted RBP6.09□□□□□ -1.43
KARSP3-201ENST00000571212 ZNF669Q96BR6 464 aaPredicted RBP6.09□□□□□ -1.43
KARSP3-201ENST00000571212 EXOC2Q96KP1 924 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 TANGO6Q9C0B7 1094 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 TMX4Q9H1E5 349 aaPredicted RBP6.09□□□□□ -1.43
KARSP3-201ENST00000571212 MEGF9Q9H1U4 602 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 CD248Q9HCU0 757 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 ADARB2Q9NS39 739 aaKnown RBP6.09□□□□□ -1.43
KARSP3-201ENST00000571212 MIS18AQ9NYP9 233 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 GPRC5DQ9NZD1 345 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 RRP7AQ9Y3A4 280 aaKnown RBP6.09□□□□□ -1.43
KARSP3-201ENST00000571212 NUB1Q9Y5A7 615 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 POLR2AP24928 1970 aaKnown RBP6.09□□□□□ -1.43
KARSP3-201ENST00000571212 LAMB2P55268 1798 aa6.09□□□□□ -1.43
KARSP3-201ENST00000571212 TRAF5O00463 557 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 CA12O43570 354 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 NTSR2O95665 410 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 AMY2AP04746 511 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 AMY2BP19961 511 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 GPTP24298 496 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 LMOD3Q0VAK6 560 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 SLC10A5Q5PT55 438 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 CIR1Q86X95 450 aaPredicted RBP6.09□□□□□ -1.44
KARSP3-201ENST00000571212 PTRH1Q86Y79 214 aaKnown RBP6.09□□□□□ -1.44
KARSP3-201ENST00000571212 SUPT20HQ8NEM7 779 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 PTPRN2Q92932 1015 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 RTFDC1Q9BY42 306 aaPredicted RBP6.09□□□□□ -1.44
KARSP3-201ENST00000571212 CCDC113Q9H0I3 377 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 CATSPERZQ9NTU4 200 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 PGAP2Q9UHJ9 254 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 CBLCQ9ULV8 474 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 ATP6V0A2Q9Y487 856 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 PCDHA9Q9Y5H5 950 aa6.09□□□□□ -1.44
KARSP3-201ENST00000571212 CDHR2Q9BYE9 1310 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 MAPK8IP3Q9UPT6 1336 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 PDE4DIPQ5VU43 2346 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 TCERG1O14776 1098 aaKnown RBP6.08□□□□□ -1.44
KARSP3-201ENST00000571212 CNOT4O95628 575 aaKnown RBP6.08□□□□□ -1.44
KARSP3-201ENST00000571212 MYL6BP14649 208 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 PDE6AP16499 860 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 KRT15P19012 456 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 ATP2B1P20020 1258 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 CSF2RBP32927 897 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 GTF2F1P35269 517 aaKnown RBP eCLIP6.08□□□□□ -1.44
KARSP3-201ENST00000571212 GUCY1A3Q02108 690 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 CXCL9Q07325 125 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 GRM1Q13255 1194 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 PALM2Q8IXS6 379 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 DNERQ8NFT8 737 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 SH3RF3Q8TEJ3 882 aaPredicted RBP6.08□□□□□ -1.44
KARSP3-201ENST00000571212 WWC2-AS2Q96NR7 200 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 GNRHR2Q96P88 292 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 RIC8BQ9NVN3 520 aa6.08□□□□□ -1.44
KARSP3-201ENST00000571212 TAF1P21675 1872 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 C1QTNF3-AMACRE9PGA6 284 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 MAN2B1O00754 1011 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 AQP7O14520 342 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 BBOX1O75936 387 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 CELF2O95319 508 aaKnown RBP6.07□□□□□ -1.44
KARSP3-201ENST00000571212 ZNF888P0CJ79 500 aaPredicted RBP6.07□□□□□ -1.44
KARSP3-201ENST00000571212 PTPN1P18031 435 aaKnown RBP6.07□□□□□ -1.44
KARSP3-201ENST00000571212 GMPSP49915 693 aaPredicted RBP6.07□□□□□ -1.44
KARSP3-201ENST00000571212 JAM2P57087 298 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 SUMO1P63165 101 aaKnown RBP6.07□□□□□ -1.44
KARSP3-201ENST00000571212 ZXDAP98168 799 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 DBPQ10586 325 aaPredicted RBP6.07□□□□□ -1.44
KARSP3-201ENST00000571212 TNIP1Q15025 636 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 DPH6Q7L8W6 267 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 MAMDC2Q7Z304 686 aaPredicted RBP6.07□□□□□ -1.44
KARSP3-201ENST00000571212 RALYLQ86SE5 291 aaKnown RBP6.07□□□□□ -1.44
KARSP3-201ENST00000571212 FBXW5Q969U6 566 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 AJUBAQ96IF1 538 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 UTP14AQ9BVJ6 771 aaKnown RBP6.07□□□□□ -1.44
KARSP3-201ENST00000571212 KLC2Q9H0B6 622 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 IFT57Q9NWB7 429 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 SRPK3Q9UPE1 567 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 AKAP11Q9UKA4 1901 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 ABCC4O15439 1325 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 ZBED9Q6R2W3 1325 aa6.07□□□□□ -1.44
KARSP3-201ENST00000571212 FAM221BA6H8Z2 402 aa6.06□□□□□ -1.44
KARSP3-201ENST00000571212 H0Y858 1186 aa6.06□□□□□ -1.44
KARSP3-201ENST00000571212 CALD1Q05682 793 aaKnown RBP6.06□□□□□ -1.44
KARSP3-201ENST00000571212 SLFN5Q08AF3 891 aa6.06□□□□□ -1.44
KARSP3-201ENST00000571212 GPR19Q15760 415 aa6.06□□□□□ -1.44
KARSP3-201ENST00000571212 HSP90AB3PQ58FF7 597 aa6.06□□□□□ -1.44
KARSP3-201ENST00000571212 SLFN13Q68D06 897 aa6.06□□□□□ -1.44
KARSP3-201ENST00000571212 DPP8Q6V1X1 898 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms