RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 MAEAQ7L5Y9 396 aa17.31■□□□□ 0.36
USB1-208ENST00000563207 TMEM169Q96HH4 297 aa17.31■□□□□ 0.36
USB1-208ENST00000563207 POP1Q99575 1024 aaKnown RBP17.31■□□□□ 0.36
USB1-208ENST00000563207 PHF7Q9BWX1 381 aaPredicted RBP17.31■□□□□ 0.36
USB1-208ENST00000563207 GPRC5CQ9NQ84 441 aa17.31■□□□□ 0.36
USB1-208ENST00000563207 MIOSQ9NXC5 875 aa17.31■□□□□ 0.36
USB1-208ENST00000563207 PCDHA7Q9UN72 937 aa17.31■□□□□ 0.36
USB1-208ENST00000563207 TECTAO75443 2155 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.3■□□□□ 0.36
USB1-208ENST00000563207 B4GALT5O43286 388 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 SSBP05455 408 aaKnown RBP eCLIP17.3■□□□□ 0.36
USB1-208ENST00000563207 GLRA2P23416 452 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 RAB27AP51159 221 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 RNASELQ05823 741 aaKnown RBP17.3■□□□□ 0.36
USB1-208ENST00000563207 MBTD1Q05BQ5 628 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 AMHR2Q16671 573 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 TMEM119Q4V9L6 283 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 ADALQ6DHV7 355 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 CCDC73Q6ZRK6 1079 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 TAS1R1Q7RTX1 841 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 RASSF8Q8NHQ8 419 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 TCP11Q8WWU5 503 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 EPSTI1Q96J88 318 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 ZFP42Q96MM3 310 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 PNMA5Q96PV4 448 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 RSAD1Q9HA92 442 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 POLD4Q9HCU8 107 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 IPPQ9Y573 584 aa17.3■□□□□ 0.36
USB1-208ENST00000563207 ARHGEF35A5YM69 484 aa17.29■□□□□ 0.36
USB1-208ENST00000563207 TTLL13PA6NNM8 815 aa17.29■□□□□ 0.36
USB1-208ENST00000563207 INO80B-WBP1J3KQ70 363 aa17.29■□□□□ 0.36
USB1-208ENST00000563207 SKIP12755 728 aa17.29■□□□□ 0.36
USB1-208ENST00000563207 ZRSR1Q15695 479 aaKnown RBP17.29■□□□□ 0.36
USB1-208ENST00000563207 DDX53Q86TM3 631 aaKnown RBP17.29■□□□□ 0.36
USB1-208ENST00000563207 MCPH1Q8NEM0 835 aa17.29■□□□□ 0.36
USB1-208ENST00000563207 EDAQ92838 391 aa17.29■□□□□ 0.36
USB1-208ENST00000563207 PYM1Q9BRP8 204 aaKnown RBP17.29■□□□□ 0.36
USB1-208ENST00000563207 APOL6Q9BWW8 343 aa17.29■□□□□ 0.36
USB1-208ENST00000563207 BHMT2Q9H2M3 363 aa17.29■□□□□ 0.36
USB1-208ENST00000563207 KCND2Q9NZV8 630 aa17.29■□□□□ 0.36
USB1-208ENST00000563207 STK17AQ9UEE5 414 aa17.29■□□□□ 0.36
USB1-208ENST00000563207 USP20Q9Y2K6 914 aa17.29■□□□□ 0.36
USB1-208ENST00000563207 NRP1O14786 923 aa17.28■□□□□ 0.36
USB1-208ENST00000563207 ASAP2O43150 1006 aa17.28■□□□□ 0.36
USB1-208ENST00000563207 USO1O60763 962 aaKnown RBP17.28■□□□□ 0.36
USB1-208ENST00000563207 CTSAP10619 480 aa17.28■□□□□ 0.36
USB1-208ENST00000563207 ARF4P18085 180 aaPredicted RBP17.28■□□□□ 0.36
USB1-208ENST00000563207 KARSQ15046 597 aaKnown RBP17.28■□□□□ 0.36
USB1-208ENST00000563207 SPECC1Q5M775 1068 aa17.28■□□□□ 0.36
USB1-208ENST00000563207 RARS2Q5T160 578 aaKnown RBP17.28■□□□□ 0.36
USB1-208ENST00000563207 RRAGBQ5VZM2 374 aa17.28■□□□□ 0.36
USB1-208ENST00000563207 SLC22A17Q8WUG5 538 aa17.28■□□□□ 0.36
USB1-208ENST00000563207 RABGGTAQ92696 567 aa17.28■□□□□ 0.36
USB1-208ENST00000563207 PGBD4Q96DM1 585 aa17.28■□□□□ 0.36
USB1-208ENST00000563207 GAD1Q99259 594 aa17.28■□□□□ 0.36
USB1-208ENST00000563207 TIPINQ9BVW5 301 aa17.28■□□□□ 0.36
USB1-208ENST00000563207 POLR3FQ9H1D9 316 aaPredicted RBP17.28■□□□□ 0.36
USB1-208ENST00000563207 POMKQ9H5K3 350 aa17.28■□□□□ 0.36
USB1-208ENST00000563207 MARCH5Q9NX47 278 aa17.28■□□□□ 0.36
USB1-208ENST00000563207 FAM13BQ9NYF5 915 aa17.28■□□□□ 0.36
USB1-208ENST00000563207 CACNG4Q9UBN1 327 aa17.28■□□□□ 0.36
USB1-208ENST00000563207 TDRD15B5MCY1 1934 aaKnown RBP17.27■□□□□ 0.36
USB1-208ENST00000563207 ARL5CA6NH57 179 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 E9PMD0 336 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 ERLIN2O94905 339 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 MYBP10242 640 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 ITGA4P13612 1032 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 CYP11B2P19099 503 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 PLCG1P19174 1290 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 CMA1P23946 247 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 AKAP5P24588 427 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 MLH1P40692 756 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 ZXDAP98168 799 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 PTPN14Q15678 1187 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 RESP18Q5W5W9 173 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 SHC4Q6S5L8 630 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 PADI6Q6TGC4 694 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 USP49Q70CQ1 688 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 SYT2Q8N9I0 419 aaPredicted RBP17.27■□□□□ 0.36
USB1-208ENST00000563207 URGCPQ8TCY9 931 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 BSNDQ8WZ55 320 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 CXCL16Q9H2A7 254 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 SMOC2Q9H3U7 446 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 CUEDC2Q9H467 287 aa17.27■□□□□ 0.36
USB1-208ENST00000563207 NXF3Q9H4D5 531 aaKnown RBP17.27■□□□□ 0.36
USB1-208ENST00000563207 PRG3Q9Y2Y8 225 aaPredicted RBP17.27■□□□□ 0.36
USB1-208ENST00000563207 PLXNA3P51805 1871 aa17.27■□□□□ 0.35
USB1-208ENST00000563207 A0A1W2PQ27 194 aa17.26■□□□□ 0.35
USB1-208ENST00000563207 A0A1W2PQ64 194 aa17.26■□□□□ 0.35
USB1-208ENST00000563207 A0A1W2PQD8 194 aa17.26■□□□□ 0.35
USB1-208ENST00000563207 EDN1P05305 212 aa17.26■□□□□ 0.35
USB1-208ENST00000563207 PLA2G4BP0C869 781 aa17.26■□□□□ 0.35
USB1-208ENST00000563207 SCNN1GP51170 649 aa17.26■□□□□ 0.35
USB1-208ENST00000563207 MXD4Q14582 209 aaPredicted RBP17.26■□□□□ 0.35
USB1-208ENST00000563207 TRIM67Q6ZTA4 783 aa17.26■□□□□ 0.35
USB1-208ENST00000563207 IFNLR1Q8IU57 520 aaPredicted RBP17.26■□□□□ 0.35
USB1-208ENST00000563207 GSTCDQ8NEC7 633 aa17.26■□□□□ 0.35
USB1-208ENST00000563207 CASP10Q92851 521 aa17.26■□□□□ 0.35
USB1-208ENST00000563207 B3GALT6Q96L58 329 aa17.26■□□□□ 0.35
USB1-208ENST00000563207 ADAM7Q9H2U9 754 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms