RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 PPP4R3AQ6IN85 833 aa6.59□□□□□ -1.35
SYNE2-210ENST00000553455 PPP4R4Q6NUP7 873 aa6.59□□□□□ -1.35
SYNE2-210ENST00000553455 SWSAP1Q6NVH7 229 aa6.59□□□□□ -1.35
SYNE2-210ENST00000553455 NPNTQ6UXI9 565 aa6.59□□□□□ -1.35
SYNE2-210ENST00000553455 USP30Q70CQ3 517 aa6.59□□□□□ -1.35
SYNE2-210ENST00000553455 TTC7BQ86TV6 843 aa6.59□□□□□ -1.35
SYNE2-210ENST00000553455 DRC7Q8IY82 874 aa6.59□□□□□ -1.35
SYNE2-210ENST00000553455 TRMT2AQ8IZ69 625 aaKnown RBP6.59□□□□□ -1.35
SYNE2-210ENST00000553455 PQLC1Q8N2U9 271 aa6.59□□□□□ -1.35
SYNE2-210ENST00000553455 ZGPATQ8N5A5 531 aaKnown RBP6.59□□□□□ -1.35
SYNE2-210ENST00000553455 FAM156AQ8NDB6 213 aa6.59□□□□□ -1.35
SYNE2-210ENST00000553455 SVIPQ8NHG7 77 aa6.59□□□□□ -1.35
SYNE2-210ENST00000553455 FBXO41Q8TF61 875 aa6.59□□□□□ -1.35
SYNE2-210ENST00000553455 GCDHQ92947 438 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-210ENST00000553455 TDP1Q9NUW8 608 aa6.59□□□□□ -1.35
SYNE2-210ENST00000553455 FAM50BQ9Y247 325 aa6.59□□□□□ -1.35
SYNE2-210ENST00000553455 STXBP5LQ9Y2K9 1186 aa6.59□□□□□ -1.35
SYNE2-210ENST00000553455 NR2E3Q9Y5X4 410 aa6.59□□□□□ -1.35
SYNE2-210ENST00000553455 NPIPB6E9PJ23 425 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 SLC16A6O15403 523 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 ITGA10O75578 1167 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 VSIG10L2P0DP72 767 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 PHKG2P15735 406 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 GUCY1A2P33402 732 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 CRHR1P34998 444 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 ATP2C1P98194 919 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-210ENST00000553455 NOGQ13253 232 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 NFYCQ13952 458 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 SAFBQ15424 915 aaKnown RBP eCLIP6.58□□□□□ -1.36
SYNE2-210ENST00000553455 VMACQ2NL98 169 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 ZMAT1Q5H9K5 638 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 RALYLQ86SE5 291 aaKnown RBP6.58□□□□□ -1.36
SYNE2-210ENST00000553455 COL23A1Q86Y22 540 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-210ENST00000553455 POU5F2Q8N7G0 328 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 OR14K1Q8NGZ2 314 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 PLBD2Q8NHP8 589 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 IFI44Q8TCB0 444 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 CFHR4Q92496 578 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 LDAHQ9H6V9 325 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 MANSC1Q9H8J5 431 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 KMT5AQ9NQR1 393 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 L1RE1Q9UN81 338 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 ZDHHC9Q9Y397 364 aa6.58□□□□□ -1.36
SYNE2-210ENST00000553455 ANO9A1A5B4 782 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 ARHGAP6O43182 974 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 SYN1P17600 705 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 HK3P52790 923 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 BPIFB4P59827 614 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 ATP8B2P98198 1209 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 RNF151Q2KHN1 245 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 ANO6Q4KMQ2 910 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 IL31Q6EBC2 164 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 ANKRD53Q8N9V6 530 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 REPS2Q8NFH8 660 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 KLHDC4Q8TBB5 520 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 CCHCR1Q8TD31 782 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 LCORQ96JN0 433 aaPredicted RBP6.57□□□□□ -1.36
SYNE2-210ENST00000553455 CLPTM1LQ96KA5 538 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 GPHA2Q96T91 129 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 SLC38A3Q99624 504 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 ENKD1Q9H0I2 346 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 SLC6A15Q9H2J7 730 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 BHMT2Q9H2M3 363 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 JADE2Q9NQC1 790 aa6.57□□□□□ -1.36
SYNE2-210ENST00000553455 PMM2O15305 246 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 GASTP01350 101 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 RPLP2P05387 115 aaKnown RBP6.56□□□□□ -1.36
SYNE2-210ENST00000553455 JUNP05412 331 aaKnown RBP6.56□□□□□ -1.36
SYNE2-210ENST00000553455 SLC5A1P13866 664 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 GYPEP15421 78 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 PCSK1P29120 753 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 NEK3P51956 506 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 PER3P56645 1201 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 TLE1Q04724 770 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 MTM1Q13496 603 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 HDAC1Q13547 482 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-210ENST00000553455 SEMA5AQ13591 1074 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 GAGE13Q4V321 117 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 PRAMEF14Q5SWL7 426 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 XP32Q5T750 250 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 THEMIS2Q5TEJ8 643 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 CCDC149Q6ZUS6 474 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 FBXO18Q8NFZ0 1043 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 CYFIP2Q96F07 1278 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 TMX3Q96JJ7 454 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 UHRF1Q96T88 793 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-210ENST00000553455 LANCL2Q9NS86 450 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 USP25Q9UHP3 1055 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 RNF114Q9Y508 228 aa6.56□□□□□ -1.36
SYNE2-210ENST00000553455 MYBBP1AQ9BQG0 1328 aaKnown RBP6.55□□□□□ -1.36
SYNE2-210ENST00000553455 A0A088AWK7 358 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 MROH6A6NGR9 719 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 MATN2O00339 956 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 GPR32O75388 356 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 FPR1P21462 350 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 SLURP1P55000 103 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 RAB1AP62820 205 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 FAM193AP78312 1265 aa6.55□□□□□ -1.36
SYNE2-210ENST00000553455 NKX6-1P78426 367 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-210ENST00000553455 DUSP2Q05923 314 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms