RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 CALML4Q96GE6 196 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TMEM169Q96HH4 297 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PLIN2Q99541 437 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CDCA3Q99618 268 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TMEM175Q9BSA9 504 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TIPINQ9BVW5 301 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 GBP3Q9H0R5 595 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 KCNG1Q9UIX4 513 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 FAN1Q9Y2M0 1017 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 GIT1Q9Y2X7 761 aa10.74□□□□□ -0.69
TNFRSF1A-214ENST00000543048 FSD2A1L4K1 749 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 GRXCR2A6NFK2 248 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ARL5CA6NH57 179 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CCDC169A6NNP5 214 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 N4BP3O15049 544 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PER2O15055 1255 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 INPPL1O15357 1258 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 HIP1RO75146 1068 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ZC3H11AO75152 810 aaKnown RBP eCLIP10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 DDHD2O94830 711 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CXCL14O95715 111 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 POMCP01189 267 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SSBP05455 408 aaKnown RBP eCLIP10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PRKCBP05771 671 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PLA2G4BP0C869 781 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 LIG1P18858 919 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 AFF1P51825 1210 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PEX3P56589 373 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TMEM132AQ24JP5 1023 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PLPP4Q5VZY2 271 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 DDX53Q86TM3 631 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CDR2LQ86X02 465 aaPredicted RBP10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 IGSF21Q96ID5 467 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 DRC1Q96MC2 740 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 HS3ST6Q96QI5 342 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 GAD1Q99259 594 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TCF25Q9BQ70 676 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NTPCRQ9BSD7 190 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 RUSC1Q9BVN2 902 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 APOL6Q9BWW8 343 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CCDC113Q9H0I3 377 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ZSCAN16Q9H4T2 348 aaPredicted RBP10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TMEM134Q9H6X4 195 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 C17orf75Q9HAS0 396 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ENTPD7Q9NQZ7 604 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 MIOSQ9NXC5 875 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 DNAJB4Q9UDY4 337 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 STK39Q9UEW8 545 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 FAM50BQ9Y247 325 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 HES2Q9Y543 173 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PCDHGC5Q9Y5F6 944 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CLIC4Q9Y696 253 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 MYO10Q9HD67 2058 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 C5orf42Q9H799 3197 aa10.73□□□□□ -0.69
TNFRSF1A-214ENST00000543048 LINC01565O15544 149 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 STX6O43752 255 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 AKAP5P24588 427 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 GUCY2CP25092 1073 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NPTX2P47972 431 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SLC11A1P49279 550 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NDUFV1P49821 464 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SLC12A3P55017 1021 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 DLX2Q07687 328 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 RESTQ13127 1097 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SMC1AQ14683 1233 aaKnown RBP10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 DUSP6Q16828 381 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TMEM119Q4V9L6 283 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NT5DC1Q5TFE4 455 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 APBB1IPQ7Z5R6 666 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 HSCBQ8IWL3 235 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 DAW1Q8N136 415 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 MRPL43Q8N983 215 aaKnown RBP10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NECAB3Q96P71 396 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ADPGKQ9BRR6 497 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PDZD7Q9H5P4 517 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 KMT5AQ9NQR1 393 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 KCND2Q9NZV8 630 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PARP2Q9UGN5 583 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CD207Q9UJ71 328 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 MTMR6Q9Y217 621 aa10.72□□□□□ -0.69
TNFRSF1A-214ENST00000543048 C2orf71A6NGG8 1288 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SFI1A8K8P3 1242 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 HIDE1A8MVS5 230 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NRP1O14786 923 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NR1I2O75469 434 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PDIA4P13667 645 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SMTNP53814 917 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 GRIN1Q05586 938 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TCHHQ07283 1943 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 MAPK7Q13164 816 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 DMP1Q13316 513 aaPredicted RBP10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 GIT2Q14161 759 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PTPAQ15257 358 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ARSHQ5FYA8 562 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 FAM173BQ6P4H8 233 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 TMEM184AQ6ZMB5 413 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 PHLPP2Q6ZVD8 1323 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 FAM178BQ8IXR5 827 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 COLGALT2Q8IYK4 626 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 VPS52Q8N1B4 723 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms