RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 WNT7AO00755 349 aa13.52□□□□□ -0.25
DDX55-206ENST00000539934 ADCY3O60266 1144 aa13.52□□□□□ -0.25
DDX55-206ENST00000539934 ATP5DP30049 168 aa13.52□□□□□ -0.25
DDX55-206ENST00000539934 TUFMP49411 452 aaKnown RBP13.52□□□□□ -0.25
DDX55-206ENST00000539934 DR1Q01658 176 aa13.52□□□□□ -0.25
DDX55-206ENST00000539934 SLC44A4Q53GD3 710 aa13.52□□□□□ -0.25
DDX55-206ENST00000539934 C11orf57Q6ZUT1 292 aaPredicted RBP13.52□□□□□ -0.25
DDX55-206ENST00000539934 RASGRP4Q8TDF6 673 aa13.52□□□□□ -0.25
DDX55-206ENST00000539934 SDCCAG3Q96C92 435 aa13.52□□□□□ -0.25
DDX55-206ENST00000539934 DDX27Q96GQ7 796 aaKnown RBP13.52□□□□□ -0.25
DDX55-206ENST00000539934 SRPK1Q96SB4 655 aaKnown RBP13.52□□□□□ -0.25
DDX55-206ENST00000539934 DRC3Q9H069 523 aa13.52□□□□□ -0.25
DDX55-206ENST00000539934 CSRNP2Q9H175 543 aa13.52□□□□□ -0.25
DDX55-206ENST00000539934 FAM204AQ9H8W3 233 aa13.52□□□□□ -0.25
DDX55-206ENST00000539934 ADAMTS3O15072 1205 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 DNAJC8O75937 253 aaPredicted RBP13.51□□□□□ -0.25
DDX55-206ENST00000539934 KRT14P02533 472 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 INHAP05111 366 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 SNHG28P0DPA3 235 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 PRMT2P55345 433 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 PPATQ06203 517 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 BNIP1Q12981 228 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 MRPL28Q13084 256 aaKnown RBP13.51□□□□□ -0.25
DDX55-206ENST00000539934 ZNF362Q5T0B9 420 aaPredicted RBP13.51□□□□□ -0.25
DDX55-206ENST00000539934 C10orf62Q5T681 223 aaPredicted RBP13.51□□□□□ -0.25
DDX55-206ENST00000539934 DGLUCYQ7Z3D6 616 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 CCDC84Q86UT8 332 aaPredicted RBP13.51□□□□□ -0.25
DDX55-206ENST00000539934 DAGLBQ8NCG7 672 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 FERMT2Q96AC1 680 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 TRAPPC9Q96Q05 1148 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 PSKH2Q96QS6 385 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 HNRNPABQ99729 332 aaKnown RBP13.51□□□□□ -0.25
DDX55-206ENST00000539934 NAT10Q9H0A0 1025 aaKnown RBP13.51□□□□□ -0.25
DDX55-206ENST00000539934 RIOX1Q9H6W3 641 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 SPC25Q9HBM1 224 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 CASS4Q9NQ75 786 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 KCTD5Q9NXV2 234 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 TTC7AQ9ULT0 858 aaPredicted RBP13.51□□□□□ -0.25
DDX55-206ENST00000539934 ATRNL1Q5VV63 1379 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 GTPBP10A4D1E9 387 aaKnown RBP13.51□□□□□ -0.25
DDX55-206ENST00000539934 A6NNZ2 444 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 SUPT3HO75486 399 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 STAMBPO95630 424 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 PRLRP16471 622 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 CDC25BP30305 580 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 MCM7P33993 719 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 SKIV2L2P42285 1042 aaKnown RBP13.51□□□□□ -0.25
DDX55-206ENST00000539934 MTTPP55157 894 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 PDE1BQ01064 536 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 KLC1Q07866 573 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 PTGDRQ13258 359 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 TUBB8Q3ZCM7 444 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 UNC5DQ6UXZ4 953 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 ARHGEF18Q6ZSZ5 1173 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 C7orf61Q8IZ16 206 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 FUKQ8N0W3 1084 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 CCAR2Q8N163 923 aaKnown RBP13.51□□□□□ -0.25
DDX55-206ENST00000539934 LRRN4CLQ8ND94 238 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 ZNF341Q9BYN7 854 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 C6orf50Q9HD87 102 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 PCDHA6Q9UN73 950 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 PCDHA8Q9Y5H6 950 aa13.51□□□□□ -0.25
DDX55-206ENST00000539934 PHLPP2Q6ZVD8 1323 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 ADGRA2Q96PE1 1338 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 SMCO2A6NFE2 343 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 BECN2A8MW95 431 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 POLR2DO15514 142 aaKnown RBP13.5□□□□□ -0.25
DDX55-206ENST00000539934 GDF11O95390 407 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 IBSPP21815 317 aaPredicted RBP13.5□□□□□ -0.25
DDX55-206ENST00000539934 GNA11P29992 359 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 ACADSBP45954 432 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 FCGRTP55899 365 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 UBASH3AP57075 661 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 ZNF543Q08ER8 600 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 BBS9Q3SYG4 887 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 FAM209AQ5JX71 171 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 GKAP1Q5VSY0 366 aaPredicted RBP13.5□□□□□ -0.25
DDX55-206ENST00000539934 TATDN1Q6P1N9 297 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 GOLM1Q8NBJ4 401 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 NUP58Q9BVL2 599 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 ZMYND12Q9H0C1 365 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 NSRP1Q9H0G5 558 aaKnown RBP13.5□□□□□ -0.25
DDX55-206ENST00000539934 KANSL2Q9H9L4 492 aa13.5□□□□□ -0.25
DDX55-206ENST00000539934 COL2A1P02458 1487 aaPredicted RBP13.5□□□□□ -0.25
DDX55-206ENST00000539934 hCG_1984214I3L0E3 225 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 M0R2N6 131 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 CSPG5O95196 566 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 EEF2P13639 858 aaKnown RBP13.49□□□□□ -0.25
DDX55-206ENST00000539934 WEE1P30291 646 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 ATP2C1P98194 919 aaPredicted RBP13.49□□□□□ -0.25
DDX55-206ENST00000539934 POU5F1BQ06416 359 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 ABCB5Q2M3G0 1257 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 GPATCH4Q5T3I0 446 aaKnown RBP13.49□□□□□ -0.25
DDX55-206ENST00000539934 GPAT2Q6NUI2 795 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 CEP128Q6ZU80 1094 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 TMEM179Q6ZVK1 233 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 FAM20CQ8IXL6 584 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 CCDC13Q8IYE1 715 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 SLAIN1Q8ND83 568 aa13.49□□□□□ -0.25
DDX55-206ENST00000539934 SKA1Q96BD8 255 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms