RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 URGCPQ8TCY9 931 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 PSPC1Q8WXF1 523 aaKnown RBP11.9□□□□□ -0.5
C11orf54-209ENST00000530620 PGBD4Q96DM1 585 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 RIPOR3Q96MK2 946 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 PRRX2Q99811 253 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 RSAD1Q9HA92 442 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 FAM86C1Q9NVL1 165 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 RGL1Q9NZL6 768 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 SORCS3Q9UPU3 1222 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 TRIP11Q15643 1979 aa11.9□□□□□ -0.5
C11orf54-209ENST00000530620 CARNS1A5YM72 827 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 ZBTB39O15060 712 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 DKC1O60832 514 aaKnown RBP eCLIP11.89□□□□□ -0.51
C11orf54-209ENST00000530620 CDKL5O76039 1030 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 CTDNEP1O95476 244 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 SSBP05455 408 aaKnown RBP eCLIP11.89□□□□□ -0.51
C11orf54-209ENST00000530620 P4HBP07237 508 aaKnown RBP11.89□□□□□ -0.51
C11orf54-209ENST00000530620 AVPR2P30518 371 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 HOXA11P31270 313 aaPredicted RBP11.89□□□□□ -0.51
C11orf54-209ENST00000530620 YWHABP31946 246 aaKnown RBP11.89□□□□□ -0.51
C11orf54-209ENST00000530620 CYP4A11Q02928 519 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 GIT2Q14161 759 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 XKR9Q5GH70 373 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 NCAPH2Q6IBW4 605 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 SRGAP1Q7Z6B7 1085 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 C4orf19Q8IY42 314 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 TMEM87AQ8NBN3 555 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 DYDC2Q96IM9 177 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 KDM4CQ9H3R0 1056 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 TPCN1Q9ULQ1 816 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 PPME1Q9Y570 386 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 DOCK6Q96HP0 2047 aa11.89□□□□□ -0.51
C11orf54-209ENST00000530620 CNTNAP2Q9UHC6 1331 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 VWA8A3KMH1 1905 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 TBX3O15119 743 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 PFKFB2O60825 505 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 POMCP01189 267 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 CLCN4P51793 760 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 NR5A1Q13285 461 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 CTTNQ14247 550 aaKnown RBP11.88□□□□□ -0.51
C11orf54-209ENST00000530620 EPHA7Q15375 998 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 TMC5Q6UXY8 1006 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 MRPL10Q7Z7H8 261 aaKnown RBP11.88□□□□□ -0.51
C11orf54-209ENST00000530620 FERMT3Q86UX7 667 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 CABP7Q86V35 215 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 UBALD2Q8IYN6 164 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 RNF149Q8NC42 400 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 SMG8Q8ND04 991 aaKnown RBP11.88□□□□□ -0.51
C11orf54-209ENST00000530620 SPIRE2Q8WWL2 714 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 SFXN1Q9H9B4 322 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 XPNPEP1Q9NQW7 623 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 MARCH5Q9NX47 278 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 DBR1Q9UK59 544 aaKnown RBP11.88□□□□□ -0.51
C11orf54-209ENST00000530620 SLC27A5Q9Y2P5 690 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 MYH15Q9Y2K3 1946 aa11.88□□□□□ -0.51
C11orf54-209ENST00000530620 USP34Q70CQ2 3546 aa11.87□□□□□ -0.51
C11orf54-209ENST00000530620 GAS2O43903 313 aaKnown RBP11.87□□□□□ -0.51
C11orf54-209ENST00000530620 MARCH6O60337 910 aa11.87□□□□□ -0.51
C11orf54-209ENST00000530620 TSPAN1O60635 241 aa11.87□□□□□ -0.51
C11orf54-209ENST00000530620 ERLIN2O94905 339 aa11.87□□□□□ -0.51
C11orf54-209ENST00000530620 CNPP09543 421 aaKnown RBP11.87□□□□□ -0.51
C11orf54-209ENST00000530620 XBP1P17861 261 aa11.87□□□□□ -0.51
C11orf54-209ENST00000530620 NCLP19338 710 aaKnown RBP11.87□□□□□ -0.51
C11orf54-209ENST00000530620 MLH1P40692 756 aa11.87□□□□□ -0.51
C11orf54-209ENST00000530620 ATAT1Q5SQI0 421 aa11.87□□□□□ -0.51
C11orf54-209ENST00000530620 EXOC8Q8IYI6 725 aa11.87□□□□□ -0.51
C11orf54-209ENST00000530620 ZDHHC14Q8IZN3 488 aa11.87□□□□□ -0.51
C11orf54-209ENST00000530620 TCP11Q8WWU5 503 aa11.87□□□□□ -0.51
C11orf54-209ENST00000530620 CPB2Q96IY4 423 aa11.87□□□□□ -0.51
C11orf54-209ENST00000530620 KLHL5Q96PQ7 755 aa11.87□□□□□ -0.51
C11orf54-209ENST00000530620 TMEM175Q9BSA9 504 aa11.87□□□□□ -0.51
C11orf54-209ENST00000530620 EIF2AQ9BY44 585 aaKnown RBP11.87□□□□□ -0.51
C11orf54-209ENST00000530620 ZSWIM4Q9H7M6 989 aa11.87□□□□□ -0.51
C11orf54-209ENST00000530620 ORC3Q9UBD5 711 aaPredicted RBP11.87□□□□□ -0.51
C11orf54-209ENST00000530620 PRG3Q9Y2Y8 225 aaPredicted RBP11.87□□□□□ -0.51
C11orf54-209ENST00000530620 IPPQ9Y573 584 aa11.87□□□□□ -0.51
C11orf54-209ENST00000530620 WNT7AO00755 349 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 C2CD2LO14523 706 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 NRP1O14786 923 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 LILRB3O75022 631 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 URODP06132 367 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 ITGA4P13612 1032 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 FDPSP14324 419 aaKnown RBP11.86□□□□□ -0.51
C11orf54-209ENST00000530620 KLRC2P26717 231 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 AK2P54819 239 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 CAPSQ13938 189 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 CCDC149Q6ZUS6 474 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 OTUD6AQ7L8S5 288 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 GPR149Q86SP6 731 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 PPFIBP1Q86W92 1011 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 TPH2Q8IWU9 490 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 COLGALT2Q8IYK4 626 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 TMEM105Q8N8V8 129 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 TNFRSF25Q93038 417 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 FAM193BQ96PV7 902 aaPredicted RBP11.86□□□□□ -0.51
C11orf54-209ENST00000530620 GAD1Q99259 594 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 NAP1L4Q99733 375 aaKnown RBP11.86□□□□□ -0.51
C11orf54-209ENST00000530620 EIF2AK1Q9BQI3 630 aaKnown RBP11.86□□□□□ -0.51
C11orf54-209ENST00000530620 HERC2P3Q9BVR0 1158 aa11.86□□□□□ -0.51
C11orf54-209ENST00000530620 EMILIN2Q9BXX0 1053 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms