RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 RBM12Q9NTZ6 932 aaKnown RBP12.46□□□□□ -0.42
USP35-207ENST00000530546 DMGDHQ9UI17 866 aaKnown RBP12.46□□□□□ -0.42
USP35-207ENST00000530546 FBXL5Q9UKA1 691 aa12.46□□□□□ -0.42
USP35-207ENST00000530546 USP20Q9Y2K6 914 aa12.46□□□□□ -0.42
USP35-207ENST00000530546 AFG3L2Q9Y4W6 797 aa12.46□□□□□ -0.42
USP35-207ENST00000530546 USP2O75604 605 aaPredicted RBP12.45□□□□□ -0.42
USP35-207ENST00000530546 ADRB2P07550 413 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 ALCAMQ13740 583 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 VGLL4Q14135 290 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 SEPT14Q6ZU15 432 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 OTUD6AQ7L8S5 288 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 CCDC60Q8IWA6 550 aaPredicted RBP12.45□□□□□ -0.42
USP35-207ENST00000530546 CD302Q8IX05 232 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 ANKRD35Q8N283 1001 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 ZNF483Q8TF39 744 aaPredicted RBP12.45□□□□□ -0.42
USP35-207ENST00000530546 TAF4BQ92750 862 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 KAT5Q92993 513 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 RNPC3Q96LT9 517 aaKnown RBP12.45□□□□□ -0.42
USP35-207ENST00000530546 GPR88Q9GZN0 384 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 HOXC10Q9NYD6 342 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 PCDHGC5Q9Y5F6 944 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 BRCA1P38398 1863 aaKnown RBP12.45□□□□□ -0.42
USP35-207ENST00000530546 ADM5C9JUS6 153 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 KCNK3O14649 394 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 MAPTP10636 758 aaKnown RBP12.45□□□□□ -0.42
USP35-207ENST00000530546 GALCP54803 685 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 ACTR2P61160 394 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 ADCY2Q08462 1091 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 MTERF2Q49AM1 385 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 CFAP221Q4G0U5 840 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 MEI1Q5TIA1 1274 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 FAM228AQ86W67 206 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 ATP6V0A1Q93050 837 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 FAM84AQ96KN4 292 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 POP1Q99575 1024 aaKnown RBP12.45□□□□□ -0.42
USP35-207ENST00000530546 SLC9A2Q9UBY0 812 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 TBX20Q9UMR3 447 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 ADAMTS5Q9UNA0 930 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.45□□□□□ -0.42
USP35-207ENST00000530546 DOCK1Q14185 1865 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 PSAPP07602 524 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 NR1D1P20393 614 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 TNFAIP3P21580 790 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 GBP2P32456 591 aaPredicted RBP12.45□□□□□ -0.42
USP35-207ENST00000530546 MDH1P40925 334 aaKnown RBP12.45□□□□□ -0.42
USP35-207ENST00000530546 ATP1A2P50993 1020 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 OAZ1P54368 228 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 NCKAP1LP55160 1127 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 PRKCEQ02156 737 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 CETN1Q12798 172 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 RPS6KA1Q15418 735 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 C10orf76Q5T2E6 689 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 XRRA1Q6P2D8 792 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 CYFIP1Q7L576 1253 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 GPC2Q8N158 579 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 TSEN2Q8NCE0 465 aaKnown RBP12.45□□□□□ -0.42
USP35-207ENST00000530546 TMEM161BQ8NDZ6 487 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.45□□□□□ -0.42
USP35-207ENST00000530546 ZIM3Q96PE6 472 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 STIM2Q9P246 746 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 TSKSQ9UJT2 592 aa12.45□□□□□ -0.42
USP35-207ENST00000530546 TPX2Q9ULW0 747 aaKnown RBP12.45□□□□□ -0.42
USP35-207ENST00000530546 ADSSP30520 456 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 CCNHP51946 323 aaPredicted RBP12.44□□□□□ -0.42
USP35-207ENST00000530546 SP2Q02086 613 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 NAA25Q14CX7 972 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 C1orf220Q5T0J3 134 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 AP1ARQ63HQ0 302 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 GADL1Q6ZQY3 521 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 CCDC125Q86Z20 511 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 BICD1Q96G01 975 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 TOPORSQ9NS56 1045 aaPredicted RBP12.44□□□□□ -0.42
USP35-207ENST00000530546 TAS2R14Q9NYV8 317 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 SNCAIPQ9Y6H5 919 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 SSC5DA1L4H1 1573 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 HMGB1P1B2RPK0 211 aaPredicted RBP12.44□□□□□ -0.42
USP35-207ENST00000530546 CNGA1P29973 690 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 MXI1P50539 228 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 INHBEP58166 350 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 GUCY1A3Q02108 690 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 XRCC4Q13426 336 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 MYBPC2Q14324 1141 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 KCTD19Q17RG1 926 aaPredicted RBP12.44□□□□□ -0.42
USP35-207ENST00000530546 GNPTABQ3T906 1256 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 GLE1Q53GS7 698 aaKnown RBP12.44□□□□□ -0.42
USP35-207ENST00000530546 C8orf74Q6P047 294 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 PALB2Q86YC2 1186 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 LMO3Q8TAP4 145 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 SLC20A1Q8WUM9 679 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 OSGEPQ9NPF4 335 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 EXOC7Q9UPT5 735 aa12.44□□□□□ -0.42
USP35-207ENST00000530546 LMNB1P20700 586 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 SSR1P43307 286 aaKnown RBP12.43□□□□□ -0.42
USP35-207ENST00000530546 SNRNP35Q16560 246 aaKnown RBP12.43□□□□□ -0.42
USP35-207ENST00000530546 EEPD1Q7L9B9 569 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 ARMC9Q7Z3E5 817 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 MREGQ8N565 214 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 ARFGAP2Q8N6H7 521 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 TPCN2Q8NHX9 752 aa12.43□□□□□ -0.42
USP35-207ENST00000530546 ZNF526Q8TF50 670 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms