RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 KBTBD4Q9NVX7 518 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 SPG21Q9NZD8 308 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 LMCD1Q9NZU5 365 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 STK39Q9UEW8 545 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 TBX20Q9UMR3 447 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 HES2Q9Y543 173 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 PCDHB13Q9Y5F0 798 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 MICAL3Q7RTP6 2002 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 A0A087X0B3 334 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 A0A1B0GVL5 298 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 FSD2A1L4K1 749 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 ARL5CA6NH57 179 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 C5orf67F2Z3F1 127 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 OFD1O75665 1012 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 RECQL4O94761 1208 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 ARHGEF15O94989 841 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 KIF20AO95235 890 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 POMCP01189 267 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 AKAP5P24588 427 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 NMT1P30419 496 aaKnown RBP5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 CA8P35219 290 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 GRM5P41594 1212 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 AFMP43652 599 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 BCAR1P56945 870 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 GRIK3Q13003 919 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 COASYQ13057 564 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 POSTNQ15063 836 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 E2F4Q16254 413 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 FAM26FQ5R3K3 315 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 NT5DC1Q5TFE4 455 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 SLFN12LQ6IEE8 588 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 PDE12Q6L8Q7 609 aaKnown RBP5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 KCNT2Q6UVM3 1135 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 AGMOQ6ZNB7 445 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 MAP4K3Q8IVH8 894 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 CRIPAKQ8N1N5 446 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 SMG8Q8ND04 991 aaKnown RBP5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 MICAL1Q8TDZ2 1067 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 LRRC15Q8TF66 581 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 STAMQ92783 540 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 MRPL38Q96DV4 380 aaKnown RBP5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 TMEM169Q96HH4 297 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 ACAP3Q96P50 834 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 ACCSQ96QU6 501 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 GAD1Q99259 594 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 C7orf25Q9BPX7 421 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 TMEM175Q9BSA9 504 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 TARS2Q9BW92 718 aaKnown RBP5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 TRIM9Q9C026 710 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 CDT1Q9H211 546 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 ST6GALNAC4Q9H4F1 302 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 TMEM206Q9H813 350 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 ENTPD7Q9NQZ7 604 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 RNF19AQ9NV58 838 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 SLC38A7Q9NVC3 462 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 TBC1D13Q9NVG8 400 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 SNTG2Q9NY99 539 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 TBC1D7Q9P0N9 293 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 SERTAD1Q9UHV2 236 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 GDAQ9Y2T3 454 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 UBE4BO95155 1302 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 WDR81Q562E7 1941 aa5.91□□□□□ -1.46
HMGB1P40-201ENST00000525121 DNAH12Q6ZR08 3092 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 TET1Q8NFU7 2136 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 MYH15Q9Y2K3 1946 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 PVALEFA0A1B0GWK0 134 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 FRMD3A2A2Y4 597 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 EPOPA6NHQ4 379 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 RFXAPO00287 272 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 TULP1O00294 542 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 OGTO15294 1046 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 INPPL1O15357 1258 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 EIF3DO15371 548 aaKnown RBP eCLIP5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 XPOTO43592 962 aaKnown RBP5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 ACTN4O43707 911 aaKnown RBP5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 KINO60870 393 aaKnown RBP5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 FGF18O76093 207 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 CSPG5O95196 566 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 SMC2O95347 1197 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 SLC34A2O95436 690 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 PIGRP01833 764 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 ALDH2P05091 517 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 THP07101 528 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 CLTAP09496 248 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 SRGAP2BP0DMP2 458 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 OR1G1P47890 313 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 SCNN1GP51170 649 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 NDUFA8P51970 172 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 OSTNP61366 133 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 GTF2BQ00403 316 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 FAM160A1Q05DH4 1040 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 PPP2R3AQ06190 1150 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 MCL1Q07820 350 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 L1TD1Q5T7N2 865 aaKnown RBP5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 EEF1DP3Q658K8 133 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 CNNM4Q6P4Q7 775 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 UNC13DQ70J99 1090 aa5.9□□□□□ -1.46
HMGB1P40-201ENST00000525121 HS2ST1Q7LGA3 356 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms