RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 KCNK5O95279 499 aa19.63■□□□□ 0.73
PVT1-220ENST00000524165 POU2F2P09086 479 aa19.63■□□□□ 0.73
PVT1-220ENST00000524165 RPL17P18621 184 aaKnown RBP19.63■□□□□ 0.73
PVT1-220ENST00000524165 NCLP19338 710 aaKnown RBP19.63■□□□□ 0.73
PVT1-220ENST00000524165 RXRAP19793 462 aa19.63■□□□□ 0.73
PVT1-220ENST00000524165 CXCL12P48061 93 aa19.63■□□□□ 0.73
PVT1-220ENST00000524165 PPM1LQ5SGD2 360 aa19.63■□□□□ 0.73
PVT1-220ENST00000524165 LIN9Q5TKA1 542 aa19.63■□□□□ 0.73
PVT1-220ENST00000524165 FUT10Q6P4F1 479 aa19.63■□□□□ 0.73
PVT1-220ENST00000524165 CASC1Q6TDU7 716 aa19.63■□□□□ 0.73
PVT1-220ENST00000524165 CNNM3Q8NE01 707 aa19.63■□□□□ 0.73
PVT1-220ENST00000524165 B3GALT6Q96L58 329 aa19.63■□□□□ 0.73
PVT1-220ENST00000524165 DISC1Q9NRI5 854 aa19.63■□□□□ 0.73
PVT1-220ENST00000524165 NDRG2Q9UN36 371 aaKnown RBP19.63■□□□□ 0.73
PVT1-220ENST00000524165 SDK1Q7Z5N4 2213 aa19.63■□□□□ 0.73
PVT1-220ENST00000524165 COL4A2P08572 1712 aa19.62■□□□□ 0.73
PVT1-220ENST00000524165 SMCO2A6NFE2 343 aa19.62■□□□□ 0.73
PVT1-220ENST00000524165 F8W810 466 aa19.62■□□□□ 0.73
PVT1-220ENST00000524165 UBXN11Q5T124 520 aa19.62■□□□□ 0.73
PVT1-220ENST00000524165 RHPN2Q8IUC4 686 aa19.62■□□□□ 0.73
PVT1-220ENST00000524165 C12orf50Q8NA57 414 aaPredicted RBP19.62■□□□□ 0.73
PVT1-220ENST00000524165 CEP89Q96ST8 783 aa19.62■□□□□ 0.73
PVT1-220ENST00000524165 LSM14BQ9BX40 385 aaKnown RBP19.62■□□□□ 0.73
PVT1-220ENST00000524165 NIFKQ9BYG3 293 aaKnown RBP19.62■□□□□ 0.73
PVT1-220ENST00000524165 GPR62Q9BZJ7 368 aa19.62■□□□□ 0.73
PVT1-220ENST00000524165 SUCLA2Q9P2R7 463 aaPredicted RBP19.62■□□□□ 0.73
PVT1-220ENST00000524165 NBEAQ8NFP9 2946 aa19.62■□□□□ 0.73
PVT1-220ENST00000524165 hCG_1984214I3L0E3 225 aa19.61■□□□□ 0.73
PVT1-220ENST00000524165 C8AP07357 584 aa19.61■□□□□ 0.73
PVT1-220ENST00000524165 UGCGQ16739 394 aa19.61■□□□□ 0.73
PVT1-220ENST00000524165 LONP2Q86WA8 852 aa19.61■□□□□ 0.73
PVT1-220ENST00000524165 FAM160A2Q8N612 972 aaPredicted RBP19.61■□□□□ 0.73
PVT1-220ENST00000524165 ZNF713Q8N859 430 aaPredicted RBP19.61■□□□□ 0.73
PVT1-220ENST00000524165 FANCBQ8NB91 859 aa19.61■□□□□ 0.73
PVT1-220ENST00000524165 PLA2G2FQ9BZM2 168 aa19.61■□□□□ 0.73
PVT1-220ENST00000524165 LMAN1LQ9HAT1 526 aa19.61■□□□□ 0.73
PVT1-220ENST00000524165 IFT122Q9HBG6 1241 aa19.61■□□□□ 0.73
PVT1-220ENST00000524165 POLIQ9UNA4 740 aa19.61■□□□□ 0.73
PVT1-220ENST00000524165 ARL5CA6NH57 179 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 CHURC1-FNTBB4DL54 471 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 SH2B2O14492 632 aaPredicted RBP19.6■□□□□ 0.73
PVT1-220ENST00000524165 CCL16O15467 120 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 ZNF806P0C7X5 589 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 ITGA4P13612 1032 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 HOXA11P31270 313 aaPredicted RBP19.6■□□□□ 0.73
PVT1-220ENST00000524165 LIFRP42702 1097 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 FNTBP49356 437 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 SATB1Q01826 763 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 PTH1RQ03431 593 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 SRSF5Q13243 272 aaKnown RBP19.6■□□□□ 0.73
PVT1-220ENST00000524165 STPG1Q5TH74 334 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 ELSPBP1Q96BH3 223 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 TMEM87BQ96K49 555 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 NLRP4Q96MN2 994 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 TMEM121BQ9BXQ6 578 aaPredicted RBP19.6■□□□□ 0.73
PVT1-220ENST00000524165 GDE1Q9NZC3 331 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 ADAM28Q9UKQ2 775 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 TICRRQ7Z2Z1 1910 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 WDFY3Q8IZQ1 3526 aa19.6■□□□□ 0.73
PVT1-220ENST00000524165 CNTNAP5Q8WYK1 1306 aa19.59■□□□□ 0.73
PVT1-220ENST00000524165 SRRM3A6NNA2 597 aaPredicted RBP19.59■□□□□ 0.73
PVT1-220ENST00000524165 PRC1O43663 620 aa19.59■□□□□ 0.73
PVT1-220ENST00000524165 PAPSS2O95340 614 aaPredicted RBP19.59■□□□□ 0.73
PVT1-220ENST00000524165 SFNP31947 248 aa19.59■□□□□ 0.73
PVT1-220ENST00000524165 SF3A2Q15428 464 aaKnown RBP19.59■□□□□ 0.73
PVT1-220ENST00000524165 MTERF2Q49AM1 385 aa19.59■□□□□ 0.73
PVT1-220ENST00000524165 PABPC1LQ4VXU2 614 aaKnown RBP19.59■□□□□ 0.73
PVT1-220ENST00000524165 KSR1Q8IVT5 923 aa19.59■□□□□ 0.73
PVT1-220ENST00000524165 SMG8Q8ND04 991 aaKnown RBP19.59■□□□□ 0.73
PVT1-220ENST00000524165 GAD1Q99259 594 aa19.59■□□□□ 0.73
PVT1-220ENST00000524165 SEPT9Q9UHD8 586 aaPredicted RBP19.59■□□□□ 0.73
PVT1-220ENST00000524165 SLC12A7Q9Y666 1083 aa19.59■□□□□ 0.73
PVT1-220ENST00000524165 FLNBO75369 2602 aaKnown RBP19.58■□□□□ 0.73
PVT1-220ENST00000524165 MAFO75444 373 aaPredicted RBP19.58■□□□□ 0.72
PVT1-220ENST00000524165 MLH1P40692 756 aa19.58■□□□□ 0.72
PVT1-220ENST00000524165 JAK3P52333 1124 aa19.58■□□□□ 0.72
PVT1-220ENST00000524165 PRR16Q569H4 304 aa19.58■□□□□ 0.72
PVT1-220ENST00000524165 XKR3Q5GH77 459 aa19.58■□□□□ 0.72
PVT1-220ENST00000524165 JAKMIP3Q5VZ66 844 aa19.58■□□□□ 0.72
PVT1-220ENST00000524165 SRGAP1Q7Z6B7 1085 aa19.58■□□□□ 0.72
PVT1-220ENST00000524165 SPEM1Q8N4L4 309 aa19.58■□□□□ 0.72
PVT1-220ENST00000524165 FAM3CQ92520 227 aa19.58■□□□□ 0.72
PVT1-220ENST00000524165 LOXL4Q96JB6 756 aa19.58■□□□□ 0.72
PVT1-220ENST00000524165 TRPV5Q9NQA5 729 aa19.58■□□□□ 0.72
PVT1-220ENST00000524165 RXFP3Q9NSD7 469 aa19.58■□□□□ 0.72
PVT1-220ENST00000524165 BARHL2Q9NY43 387 aa19.58■□□□□ 0.72
PVT1-220ENST00000524165 DNMT3BQ9UBC3 853 aaKnown RBP19.58■□□□□ 0.72
PVT1-220ENST00000524165 LHX6Q9UPM6 363 aa19.58■□□□□ 0.72
PVT1-220ENST00000524165 LAMA1P25391 3075 aa19.58■□□□□ 0.72
PVT1-220ENST00000524165 DMXL2Q8TDJ6 3036 aa19.57■□□□□ 0.72
PVT1-220ENST00000524165 SCNN1GP51170 649 aa19.57■□□□□ 0.72
PVT1-220ENST00000524165 RING1Q06587 406 aa19.57■□□□□ 0.72
PVT1-220ENST00000524165 UVSSAQ2YD98 709 aa19.57■□□□□ 0.72
PVT1-220ENST00000524165 RTP2Q5QGT7 225 aa19.57■□□□□ 0.72
PVT1-220ENST00000524165 TANGO2Q6ICL3 276 aa19.57■□□□□ 0.72
PVT1-220ENST00000524165 PRSS55Q6UWB4 352 aaPredicted RBP19.57■□□□□ 0.72
PVT1-220ENST00000524165 CEP68Q76N32 757 aa19.57■□□□□ 0.72
PVT1-220ENST00000524165 ING5Q8WYH8 240 aa19.57■□□□□ 0.72
PVT1-220ENST00000524165 CLSTN3Q9BQT9 956 aa19.57■□□□□ 0.72
PVT1-220ENST00000524165 JPH2Q9BR39 696 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms