RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 SLFN12LQ6IEE8 588 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 SV2AQ7L0J3 742 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 RASAL3Q86YV0 1011 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 EXOC8Q8IYI6 725 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 TAS1R2Q8TE23 839 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 AFG1LQ8WV93 481 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 ZNF516Q92618 1163 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 NOX5Q96PH1 765 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 CPA4Q9UI42 421 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 JRKLQ9Y4A0 524 aa18.25■□□□□ 0.51
SREK1-212ENST00000522912 A0A0B4J269 797 aa18.24■□□□□ 0.51
SREK1-212ENST00000522912 IGF2BP3O00425 579 aaKnown RBP eCLIP18.24■□□□□ 0.51
SREK1-212ENST00000522912 KIAA0391O15091 583 aaKnown RBP18.24■□□□□ 0.51
SREK1-212ENST00000522912 GPC3P51654 580 aa18.24■□□□□ 0.51
SREK1-212ENST00000522912 CHMP4BP1P59074 171 aa18.24■□□□□ 0.51
SREK1-212ENST00000522912 MXD4Q14582 209 aaPredicted RBP18.24■□□□□ 0.51
SREK1-212ENST00000522912 PSMD6Q15008 389 aa18.24■□□□□ 0.51
SREK1-212ENST00000522912 ZBTB41Q5SVQ8 909 aa18.24■□□□□ 0.51
SREK1-212ENST00000522912 USP37Q86T82 979 aa18.24■□□□□ 0.51
SREK1-212ENST00000522912 VPS36Q86VN1 386 aa18.24■□□□□ 0.51
SREK1-212ENST00000522912 RNF149Q8NC42 400 aa18.24■□□□□ 0.51
SREK1-212ENST00000522912 EMID1Q96A84 441 aaPredicted RBP18.24■□□□□ 0.51
SREK1-212ENST00000522912 KREMEN1Q96MU8 473 aa18.24■□□□□ 0.51
SREK1-212ENST00000522912 ERAP1Q9NZ08 941 aa18.24■□□□□ 0.51
SREK1-212ENST00000522912 ANKFY1Q9P2R3 1169 aa18.24■□□□□ 0.51
SREK1-212ENST00000522912 SUCLA2Q9P2R7 463 aaPredicted RBP18.24■□□□□ 0.51
SREK1-212ENST00000522912 ADGRA2Q96PE1 1338 aa18.24■□□□□ 0.51
SREK1-212ENST00000522912 MSCO60682 206 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 GJB1P08034 283 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 EFNA5P52803 228 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 CLDN10P78369 228 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 TEX35Q5T0J7 233 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 C15orf39Q6ZRI6 1047 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 FBXL13Q8NEE6 735 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 PPTC7Q8NI37 304 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 U2AF1L4Q8WU68 220 aaKnown RBP18.23■□□□□ 0.51
SREK1-212ENST00000522912 VTI1AQ96AJ9 217 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 ALS2CR12Q96Q35 445 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 TINF2Q9BSI4 451 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 MSTO1Q9BUK6 570 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 EPC1Q9H2F5 836 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 RAB20Q9NX57 234 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 ZNF236Q9UL36 1845 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 SLC15A5A6NIM6 579 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 CCDC172P0C7W6 258 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 ZNF157P51786 506 aaPredicted RBP18.23■□□□□ 0.51
SREK1-212ENST00000522912 LMBRD2Q68DH5 695 aaPredicted RBP18.23■□□□□ 0.51
SREK1-212ENST00000522912 CHADLQ6NUI6 762 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 EFCAB12Q6NXP0 572 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 RHPN2Q8IUC4 686 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 FMNL3Q8IVF7 1028 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 GLYCTKQ8IVS8 523 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 PDCL2Q8N4E4 241 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 GOLGA1Q92805 767 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 ELMO3Q96BJ8 720 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 JPH2Q9BR39 696 aaPredicted RBP18.23■□□□□ 0.51
SREK1-212ENST00000522912 PDE11AQ9HCR9 933 aa18.23■□□□□ 0.51
SREK1-212ENST00000522912 BTNL10A8MVZ5 291 aa18.22■□□□□ 0.51
SREK1-212ENST00000522912 ECM2O94769 699 aaPredicted RBP18.22■□□□□ 0.51
SREK1-212ENST00000522912 C22orf31O95567 290 aa18.22■□□□□ 0.51
SREK1-212ENST00000522912 INSRRP14616 1297 aa18.22■□□□□ 0.51
SREK1-212ENST00000522912 SMPD1P17405 629 aa18.22■□□□□ 0.51
SREK1-212ENST00000522912 MATR3P43243 847 aaKnown RBP eCLIP18.22■□□□□ 0.51
SREK1-212ENST00000522912 CLCN3P51790 818 aa18.22■□□□□ 0.51
SREK1-212ENST00000522912 NAP1L1P55209 391 aaKnown RBP18.22■□□□□ 0.51
SREK1-212ENST00000522912 ZPBP2Q6X784 338 aa18.22■□□□□ 0.51
SREK1-212ENST00000522912 PPM1KQ8N3J5 372 aa18.22■□□□□ 0.51
SREK1-212ENST00000522912 HELQQ8TDG4 1101 aa18.22■□□□□ 0.51
SREK1-212ENST00000522912 ZNF668Q96K58 619 aaPredicted RBP18.22■□□□□ 0.51
SREK1-212ENST00000522912 PTPRJQ12913 1337 aa18.22■□□□□ 0.51
SREK1-212ENST00000522912 LDHAP00338 332 aaKnown RBP18.22■□□□□ 0.51
SREK1-212ENST00000522912 ZNF286BP0CG31 522 aa18.22■□□□□ 0.51
SREK1-212ENST00000522912 ACVR2BQ13705 512 aa18.22■□□□□ 0.51
SREK1-212ENST00000522912 FBXO38Q6PIJ6 1188 aa18.22■□□□□ 0.51
SREK1-212ENST00000522912 TATDN2Q93075 761 aa18.22■□□□□ 0.51
SREK1-212ENST00000522912 ACO2Q99798 780 aaKnown RBP18.22■□□□□ 0.51
SREK1-212ENST00000522912 C16orf70Q9BSU1 422 aa18.22■□□□□ 0.51
SREK1-212ENST00000522912 SNX12Q9UMY4 172 aa18.22■□□□□ 0.51
SREK1-212ENST00000522912 ATP8B3O60423 1300 aa18.21■□□□□ 0.51
SREK1-212ENST00000522912 ZNF185O15231 689 aa18.21■□□□□ 0.51
SREK1-212ENST00000522912 PRKCBP05771 671 aa18.21■□□□□ 0.51
SREK1-212ENST00000522912 IGBP1P78318 339 aa18.21■□□□□ 0.51
SREK1-212ENST00000522912 PRPF4BQ13523 1007 aaKnown RBP18.21■□□□□ 0.51
SREK1-212ENST00000522912 DUSP28Q4G0W2 176 aa18.21■□□□□ 0.51
SREK1-212ENST00000522912 SEZ6Q53EL9 994 aa18.21■□□□□ 0.51
SREK1-212ENST00000522912 ZNF484Q5JVG2 852 aa18.21■□□□□ 0.51
SREK1-212ENST00000522912 ZBTB8OSQ8IWT0 167 aa18.21■□□□□ 0.51
SREK1-212ENST00000522912 METTL13Q8N6R0 699 aa18.21■□□□□ 0.51
SREK1-212ENST00000522912 SLC20A1Q8WUM9 679 aa18.21■□□□□ 0.51
SREK1-212ENST00000522912 RABGGTAQ92696 567 aa18.21■□□□□ 0.51
SREK1-212ENST00000522912 NT5C1BQ96P26 610 aa18.21■□□□□ 0.51
SREK1-212ENST00000522912 FNBP1Q96RU3 617 aa18.21■□□□□ 0.51
SREK1-212ENST00000522912 MRPL4Q9BYD3 311 aaKnown RBP18.21■□□□□ 0.51
SREK1-212ENST00000522912 ABHD16BQ9H3Z7 469 aa18.21■□□□□ 0.51
SREK1-212ENST00000522912 RBAKQ9NYW8 714 aaPredicted RBP18.21■□□□□ 0.51
SREK1-212ENST00000522912 ADCY6O43306 1168 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 NCK2O43639 380 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 PALMO75781 387 aa18.2■□□□□ 0.5
SREK1-212ENST00000522912 C4BPAP04003 597 aaKnown RBP18.2■□□□□ 0.5
SREK1-212ENST00000522912 H2AFZP0C0S5 128 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms